Enterobacteria phage T7 CJ terminator Lyzozyme dependent terminator of late genes experimental atctgtt Enterobacteria phage T7 A0(D) promoter T7 minor leftward early promoter for host RNA polymerase experimental ttgacttgatgggtctttaggtgtaggctttaggtg -35 gtcaa -10 agccta +1 c Enterobacteria phage T7 phiOL promoter Bacteriophage T7 phiOL promoter for T7 RNA polymerase experimental taatacaactcactataa -10 taata +1 a Enterobacteria phage T7 A1 promoter T7 major early promoter for host RNA polymerase experimental ttgacttaaagtctaacctataggatacttacagcca -35 ttgact -10 gatact +1 a Enterobacteria phage T7 A2 promoter T7 major early promoter for host RNA polymerase experimental ttgacaacatgaagtaacatgcagtaagatacaaatcg -35 ttgac -10 taagat +1 g Enterobacteria phage T7 A3 promoter T7 major early promoter for host RNA polymerase experimental ttgacaacatgaagtaaacacggtacgatgtaccaca -35 ttgac -10 tacgat +1 a Enterobacteria phage T7 B promoter T7 minor early promoter for host RNA polymerase predicted tttacttatgagggagtaatgtatatgct -35 tttac -10 tatgct Enterobacteria phage T7 C promoter T7 minor early promoter for host RNA polymerase experimental ttgacgcaatgttaatgggctgatagtcttatctta -35 ttgac -10 tagtct +1 a Enterobacteria phage T7 phi1.1A promoter Bacteriophage T7 phi1.1A promoter for T7 RNA polymerase experimental caatacgactcactatag -10 caata +1 g Enterobacteria phage T7 phi1.1B promoter Bacteriophage T7 phi1.1B promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 phi1.3 promoter Bacteriophage T7 phi1.3 promoter for T7 RNA polymerase experimental taatacgactcagtatag -10 taata +1 g Enterobacteria phage T7 TE terminator Bacteriophage T7 rho-independent transcriptional terminator TE predicted ggctcaccttcgggtgggcc stem_1 ggctcacc stem_2 ggtgggcc Enterobacteria phage T7 phi1.5 promoter Bacteriophage T7 phi1.5 promoter for T7 RNA polymerase experimental taatacgactcactaaag -10 taata +1 g Enterobacteria phage T7 phi1.6 promoter Bacteriophage T7 phi1.6 promoter for T7 RNA polymerase experimental taatacgactcactaaag -10 taata +1 g Enterobacteria phage T7 phi2.5 promoter Bacteriophage T7 phi2.5 promoter for T7 RNA polymerase experimental taatacgactcactatta -10 taata +1 a Enterobacteria phage T7 phi3.8 promoter Bacteriophage T7 phi3.8 promoter for T7 RNA polymerase experimental taattgaactcactaaag -10 taatt +1 g Enterobacteria phage T7 phi4c promoter Bacteriophage T7 phi4c promoter for T7 RNA polymerase experimental caatccgactcactaaag -10 caatc +1 g Enterobacteria phage T7 phi4.3 promoter Bacteriophage T7 phi4.3 promoter for T7 RNA polymerase experimental taatacgactcactaaag -10 taata +1 g Enterobacteria phage T7 phi4.7 promoter Bacteriophage T7 phi4.7 promoter for T7 RNA polymerase experimental ctattcgactcactatag -10 ctatt +1 g Enterobacteria phage T7 phi6.5 promoter Bacteriophage T7 phi6.5 promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 phi9 promoter Bacteriophage T7 phi9 promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 phi10 promoter Bacteriophage T7 phi10 promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 Tphi terminator Bacteriophage T7 rho-independent major transcriptional terminator predicted aaccccttggggcctctaaacgggtcttgaggggtt stem_1 aaccccttggggcc stem_2 gggtcttgaggggtt Enterobacteria phage T7 phi13 promoter Bacteriophage T7 phi13 promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 phi17 promoter Bacteriophage T7 phi17 promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage T7 E promoter T7 minor early promoter for host RNA polymerase experimental ttaacgggaggcattatgctagaatttt -35 ttaac -10 aatttt Enterobacteria phage T7 phiOR promoter Bacteriophage T7 phiOR promoter for T7 RNA polymerase experimental taatacgactcactatag -10 taata +1 g Enterobacteria phage P1 p2Coi promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaactgtatggatttacaggtaaatt -35 gttcaa -10 aattta Enterobacteria phage P1 p3Cre promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension Promoter probe vectors ttgatcaaggttgcgctacgtaaaat -35 ttgatc -10 taaaat Enterobacteria phage P1 p2Cre promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension Promoter probe vectors ttgatcgtgatagttgccaactgtcattat -35 ttgatc -10 cattat Enterobacteria phage P1 p1Cre promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension Promoter probe vectors tgtacactttacttaaaaccattat -35 tgtaca -10 cattat Enterobacteria phage P1 pC8 promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgtcatgaactatatccgtaacctggatagt -35 ttgtca -10 gatagt Enterobacteria phage P1 tAsRef terminator Rho-independent transcriptional terminator predicted gcctggctccttgccaggc stem_1 gccaggc stem_2 gcctggc Enterobacteria phage P1 p2Ref promoter Enterobacteria phage P1 sigma 70 promoter predicted ctatcattgctctaattgattgctataat -35 ctatca -10 tataat Enterobacteria phage P1 oRef operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p1Ref promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgccattacttcactccttgacatcat -35 ttgcca -10 catcat Enterobacteria phage P1 tC8 terminator Rho-independent transcriptional terminator predicted ggcggccattaggccgcc stem_1 ggcggcc stem_2 ggccgcc Enterobacteria phage P1 oMat operator C1-controlled operator of P1 phage experimental tgcactaa Enterobacteria phage P1 pMat promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgacaactgacaagtgacttcagtcagaat -35 ttgaca -10 cagaat Enterobacteria phage P1 LpMat promoter Enterobacteria phage P1 late promoter experimental Linker scanning mutations aagtgacttcagtcagaat -22 aagtgactt -10 cagaat Enterobacteria phage P1 tRef terminator Rho-independent transcriptional terminator predicted gccgccgctggtggc stem_1 gccgcc stem_2 ggtggc Enterobacteria phage P1 p1Res promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgccccaaacaaagtcgtgttttatggt -35 gggcaa -10 accata Enterobacteria phage P1 p2Res promoter Enterobacteria phage P1 sigma 70 promoter experimental ttaaaaaaagcacaaccacaagtgataat -35 ttttaa -10 attatc Enterobacteria phage P1 p3Res promoter Enterobacteria phage P1 sigma 70 promoter experimental ttgaaataacaaaaaaaaggatacagg -35 tttcaa -10 cctgta Enterobacteria phage P1 p1Mod promoter Enterobacteria phage P1 sigma 70 promoter experimental gtgatagtgccacaacttctggctctaac -35 tatcac -10 gttaga Enterobacteria phage P1 p2Mod promoter Enterobacteria phage P1 sigma 70 promoter experimental atgcattgcttctcaatgcggattaaact -35 atgcat -10 agttta Enterobacteria phage P1 p1Lxc promoter Enterobacteria phage P1 sigma 70 promoter experimental ctgaagaagttgacgaccaggactatgag -35 cttcag -10 ctcata Enterobacteria phage P1 p2Lxc promoter Enterobacteria phage P1 sigma 70 promoter experimental ttattactggagcgcggttatggtaattt -35 taataa -10 aaatta Enterobacteria phage P1 p3Lxc promoter Enterobacteria phage P1 sigma 70 promoter experimental ttgaggcggtactgcgtacggcattgt -35 cctcaa -10 acaatg Enterobacteria phage P1 LpPro promoter Enterobacteria phage P1 late promoter predicted aagtgactagtgttaaatt -22 aagtgacta -10 taaatt Enterobacteria phage P1 pDarB promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgtctgccaagattgcaccttaattagaat -35 agacaa -10 attcta Enterobacteria phage P1 tAsPro terminator Rho-independent transcriptional terminator predicted cgccagttcctgtggcg stem_1 tggcg stem_2 cgcca Enterobacteria phage P1 tPro terminator Rho-independent transcriptional terminator predicted ccccggcagctgccgggg stem_1 ccccggc stem_2 gccgggg Enterobacteria phage P1 tLyz terminator Rho-independent transcriptional terminator predicted ccccggcagctgccgggg stem_1 gccgggg stem_2 ccccggc Enterobacteria phage P1 tAsLyz terminator Rho-independent transcriptional terminator predicted ccgcctcctgcgg stem_1 ccgc stem_2 gcgg Enterobacteria phage P1 LpLyz promoter Enterobacteria phage P1 late promoter experimental Primer extension aagtgatttgcattatcctgtgtctt -22 aaatcactt -10 aggata +1 a Enterobacteria phage P1 p2Ssb promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors ttgttagctacgtttcaaagatatacattattgctc -35 ttgtta -10 tacatt +1 c Enterobacteria phage P1 oSsb operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p1Ssb promoter Enterobacteria phage P1 sigma 70 promoter predicted tctaattaatttattttattaggtaagat -35 tctaat -10 taagat Enterobacteria phage P1 pLyz promoter Enterobacteria phage P1 sigma 70 promoter predicted tttacaccgcgttgtgccacttatctt -35 tgtaaa -10 aagata Enterobacteria phage P1 tInsB terminator Rho-independent transcriptional terminator predicted gggtgctctctggcaccc stem_1 gcaccc stem_2 gggtgc Enterobacteria phage P1 pIsaB promoter Enterobacteria phage P1 sigma 70 promoter predicted tagacaagcaagatagggcgaattaaaat -35 tagaca -10 taaaat Enterobacteria phage P1 pInsA promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgattaattttaattcgccctatctt -35 aatcaa -10 aagata Enterobacteria phage P1 tAsDdrB terminator Rho-independent transcriptional terminator predicted cccgcccgaaatcgggcagg stem_1 cccgcccg stem_2 cgggcagg Enterobacteria phage P1 tDdrA terminator Rho-independent transcriptional terminator predicted cctgcccgatttcgggcggg stem_1 cgggcagg stem_2 cccgcccg Enterobacteria phage P1 tAsDdrA terminator Rho-independent transcriptional terminator predicted ttttggcacaccatcatgttccgaag stem_1 ttttggcaca stem_2 tgttccgaag Enterobacteria phage P1 LpDarA promoter Enterobacteria phage P1 late promoter experimental Primer extension Promoter probe vectors aagttactttgcataccattacctcctg -22 aagtaactt -10 atggta +1 c Enterobacteria phage P1 tpLydC terminator Rho-independent transcriptional terminator predicted tgctcctctccatccttggcggggtgca stem_1 tggagaggagca stem_2 tgcaccccgcca Enterobacteria phage P1 p2Cin promoter Enterobacteria phage P1 sigma 70 promoter predicted tttccttaatagtgaattaaatatcat -35 tttcct -10 tatcat Enterobacteria phage P1 p1Cin promoter Enterobacteria phage P1 sigma 70 promoter predicted tttccacacatactggtttttgttaattaaaat -35 tttcca -10 taaaat Enterobacteria phage P1 pLydC promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgatacgcgtacatagcctattagcat -35 tatcaa -10 atgcta Enterobacteria phage P1 tU terminator Rho-independent transcriptional terminator predicted ggcccgatagcgggcc stem_1 ggcccg stem_2 cgggcc Enterobacteria phage P1 LpS promoter Enterobacteria phage P1 late promoter experimental Primer extension Promoter probe vectors aagttacttatcttacaatgaggcttc -22 aagtaactt -10 attgta +1 g Enterobacteria phage P1 t2SimC terminator Rho-independent transcriptional terminator predicted ctcgtagaatcggttaacacaccagattctacgag stem_1 gattctacgag stem_2 ctcgtagaatc Enterobacteria phage P1 LpSit promoter Enterobacteria phage P1 late promoter experimental Primer extension aaatgactactcgtagaat -22 tagtcattt -10 attcta Enterobacteria phage P1 t1SimC terminator Rho-independent transcriptional terminator predicted cgcccattaaagggcg stem_1 gggcg stem_2 cgccc Enterobacteria phage P1 p1PmgC promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaaaggatagtcaatttaagttttaac -35 tttcaa -10 gttaaa Enterobacteria phage P1 p2PmgC promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgatgtaatggaaggatttgatagcat -35 catcaa -10 atgcta Enterobacteria phage P1 p3PmgC promoter Enterobacteria phage P1 sigma 70 promoter predicted ttcacaaatcaagatcctgttcagatgat -35 tgtgaa -10 atcatc Enterobacteria phage P1 pSimB promoter Enterobacteria phage P1 sigma 70 promoter predicted atgagttataaggcaggtgaggttataat -35 actcat -10 attata Enterobacteria phage P1 pSimA promoter Enterobacteria phage P1 sigma 70 promoter predicted tttaataaatacacagttggatctaat -35 attaaa -10 attaga Enterobacteria phage P1 oC4 operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p2C4 promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors ttgtatttttaagtcgcgaatgctatctt -35 ttgtat -10 tatctt Enterobacteria phage P1 p1C4 promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors ttgaccttttaatcgttcaggcttatagt -35 ttgacc -10 tatagt Enterobacteria phage P1 tAsKilA terminator Rho-independent transcriptional terminator predicted cctgccagtttgctggcagg stem_1 ctggcagg stem_2 cctgccag Enterobacteria phage P1 pKilA promoter Enterobacteria phage P1 sigma 70 promoter experimental DNase1 footprinting Linker scanning mutations tggatcgggtcagaaaaatttgctctaataaatttcg -35 tggatc -10 tctaat +1 g Enterobacteria phage P1 oKilA operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 PAskilA promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension Promoter probe vectors tcgacattttgatgaaggtttgatatattcatatccg -35 tgtcga -10 aatata +1 c Enterobacteria phage P1 pRepL promoter Enterobacteria phage P1 sigma 70 promoter predicted ttcacctggttgcgtgataacggaattct -35 ttcacc -10 aattct Enterobacteria phage P1 oRlf operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 pRlfA promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgcaattaataaacaactaacggacaat -35 ttgcaa -10 gacaat Enterobacteria phage P1 p1RlfB promoter Enterobacteria phage P1 sigma 70 promoter predicted tagagacatcaaggaattaaaattaaaac -35 tagaga -10 taaaac Enterobacteria phage P1 p2RlfB promoter Enterobacteria phage P1 sigma 70 promoter predicted ctgatttcgaaatcaagtggactaaagt -35 ctgatt -10 taaagt Enterobacteria phage P1 p3RlfB promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaattttacttagatgtcgtagatt -35 ttgaat -10 tagatt Enterobacteria phage P1 p4RlfB promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgagaaattaagaggggttcttcacaatga -35 ttgaga -10 caatga Enterobacteria phage P1 pAsrlf promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaaaagctaaagtagatcggttagatt -35 tttcaa -10 aatcta Enterobacteria phage P1 tPmgG terminator Rho-independent transcriptional terminator predicted gctccttcgggagc stem_1 ggagc stem_2 gctcc Enterobacteria phage P1 p1PmgF promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgagtgggattaagagtcatcccttgtatttt -35 actcaa -10 aaaata Enterobacteria phage P1 p2PmgF promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaaatgttggactgcaaaatctacagt -35 tttcaa -10 actgta Enterobacteria phage P1 t22 terminator Rho-independent transcriptional term predicted ggccggggaactccggcc stem_1 ccggcc stem_2 ggccgg Enterobacteria phage P1 tAs23 terminator Rho-independent transcriptional terminator predicted cccgcaaaaaccggg stem_1 cccg stem_2 cggg Enterobacteria phage P1 Lp23 promoter Enterobacteria phage P1 late promoter predicted aagtgactttcaataaaat -22 aagtcactt -10 atttta Enterobacteria phage P1 p123 promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgtcacgagaaagtcaacaagtgactttcaat -35 tgacaa -10 attgaa Enterobacteria phage P1 tParB terminator Rho-independent transcriptional terminator predicted ttcaaggtgaaatcgccacgatttcaccttgga stem_1 cgatttcaccttgaa stem_2 tccaaggtgaaatcg Enterobacteria phage P1 p223 promoter Enterobacteria phage P1 sigma 70 promoter predicted ctgtttttaaagtaaattactctaaaat -35 aaacag -10 atttta Enterobacteria phage P1 pParB promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors aagattttgctaaagcagtttttgaccgtattgaat -35 aatctt -10 acggtc +1 at Enterobacteria phage P1 pPar promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors tgtacaagcatctacgcatacattattat -35 tgtaca -10 ataata Enterobacteria phage P1 tRepA terminator Rho-independent transcriptional terminator predicted gagggggacgcccctc stem_1 ccccctc stem_2 gagggg Enterobacteria phage P1 pRepA promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension ttgctaatgtgtgctggcgggatataggat -35 tagcaa -10 atccta Enterobacteria phage P1 tUpfA terminator Rho-independent transcriptional terminator predicted ccggctacgttggccgg stem_1 tagccgg stem_2 ccggcca Enterobacteria phage P1 p1PpfA promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgatgaattaaacaaagcggcacagt -35 catcaa -10 actgtg Enterobacteria phage P1 p2PpfA promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaagcactgaaggaagctactgaacaat -35 cttcaa -10 attgtt Enterobacteria phage P1 oDmt operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 pDmt promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension ttgttttttatgtcgtgttttcggtaccat -35 ttgttt -10 taccat Enterobacteria phage P1 tHrdC terminator Rho-independent transcriptional terminator predicted ctcggtgcggaagggcggtctgag stem_1 ctcggtgcg stem_2 cggtctgag Enterobacteria phage P1 p2Ban promoter Enterobacteria phage P1 sigma 70 promoter predicted atgacgttttgggtatattgctctaataaatt -35 atgacg -10 taaatt Enterobacteria phage P1 p1Ban promoter Enterobacteria phage P1 sigma 70 promoter experimental DNase1 footprinting EMSA - gel shift ttgctctaataaatttattagtgtaatatcgcctca -35 ttgctc -10 taatat +1 a Enterobacteria phage P1 oBanA operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 oBanB operator C1-controlled operator of P1 phage experimental tacactaa Enterobacteria phage P1 tDmt terminator Rho-independent transcriptional terminator predicted gcccatcttcgggtgggc stem_1 gcccatc stem_2 ggtgggc Enterobacteria phage P1 p1Upl promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgagaatgccgagcatttattaacct -35 tctcaa -10 aggtta Enterobacteria phage P1 p2Upl promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgactccgccagccgctttgcggaattt -35 agtcaa -10 aaattc Enterobacteria phage P1 tAstciA terminator Rho-independent transcriptional terminator predicted tccgccagccgctttgcgga stem_1 gcgga stem_2 tccgc Enterobacteria phage P1 p2Dbn promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgagatgccgagccaccagctgatgat -35 ttgaga -10 gatgat Enterobacteria phage P1 p1Dbn promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaacagcgtgcggacaaacgaccggtaaatt -35 ttgaac -10 taaatt Enterobacteria phage P1 tDbn terminator Rho-independent transcriptional terminator predicted gcccgaacgccgggc stem_1 gcccg stem_2 cgggc Enterobacteria phage P1 t5 terminator Rho-independent transcriptional terminator predicted gcccggcgttcgggc stem_1 cgggc stem_2 gcccg Enterobacteria phage P1 tAs7 terminator Rho-independent transcriptional terminator predicted cctgcgtttgcagg stem_1 cctgc stem_2 gcagg Enterobacteria phage P1 Lp26 promoter Enterobacteria phage P1 late promoter experimental Primer extension aaatgactagcggtagaat -22 tagtcattt -10 attcta Enterobacteria phage P1 LpPmgL promoter Enterobacteria phage P1 late promoter experimental Promoter probe vectors tagtcatttgttgaatatt -22 tagtcattt -10 aatatt Enterobacteria phage P1 p2PmgL promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaatatttaactcaataaaagaaaat -35 ttgaat -10 gaaaat Enterobacteria phage P1 o26 operator C1-controlled operator of P1 phage experimental tgcactaa Enterobacteria phage P1 p1PmgL promoter Enterobacteria phage P1 sigma 70 promoter predicted gtgcaattttgattgtgaaatgtatcat -35 gtgcaa -10 tatcat Enterobacteria phage P1 p26 promoter Enterobacteria phage P1 sigma 70 promoter predicted gtcaaatcctgccggtcgcatgccatatt -35 tttgac -10 aatatg Enterobacteria phage P1 tAsPmgM terminator Rho-independent transcriptional terminator predicted gtgccttcgcatgtggagaaac stem_1 gaaggcac stem_2 gtttctcc Enterobacteria phage P1 pPmgN promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgaacggcgataagtggttgtatgct -35 ttgaac -10 tatgct Enterobacteria phage P1 oPpp operator C1-controlled operator of P1 phage experimental tgcactaa Enterobacteria phage P1 pPmgR promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgctctaataattccatatttttaaaac -35 ttgctc -10 taaaac Enterobacteria phage P1 oPmgRa operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 tPmgQ terminator Rho-independent transcriptional terminator predicted cgtgatgtacactcatcacg stem_1 cgtgatg stem_2 catcacg Enterobacteria phage P1 oPmgRb operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 tPmgS terminator Rho-independent transcriptional terminator predicted tgctggtggagtgcgcccaccagca stem_1 tgctggtgg stem_2 ccaccagca Enterobacteria phage P1 p1PmgT promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgatatggtgcgccagttatttaacgt -35 ttgata -10 taacgt Enterobacteria phage P1 p2PmgT promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgctctaataaatcttgatttttaaaac -35 ttgctc -10 taaaac Enterobacteria phage P1 oPmgT operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p3PgmT promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension Promoter probe vectors ttgatttttaaaacagagaaagtgaaaat -35 ttgatt -10 gaaaat Enterobacteria phage P1 tAsPmgT terminator Rho-independent transcriptional terminator predicted catgccgcgccttgcggcatg stem_1 gcggcatg stem_2 catgccgc Enterobacteria phage P1 tPap terminator Rho-independent transcriptional terminator predicted tgccgcaaggcgcggca stem_1 tgccgc stem_2 gcggca Enterobacteria phage P1 p1UpfM promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgtttccacatcaaggagattttaatgt -35 ttgttt -10 taatgt Enterobacteria phage P1 p2UpfM promoter Enterobacteria phage P1 sigma 70 promoter predicted ctgaaacattaagtaagccagtgcataat -35 ctgaaa -10 cataat Enterobacteria phage P1 pUpfN promoter Enterobacteria phage P1 sigma 70 promoter predicted ttgacgtagaaacccaacccttatatagt -35 ttgacg -10 tatagt Enterobacteria phage P1 LpHot promoter Enterobacteria phage P1 late promoter experimental Promoter probe vectors aagttactttgctggttaaataat -22 aagttactt -10 aataat Enterobacteria phage P1 p1Lxr promoter Enterobacteria phage P1 sigma 70 promoter predicted ctgatgattttgtgcgctttgctactat -35 catcag -10 atagta Enterobacteria phage P1 p1HumD promoter Enterobacteria phage P1 sigma 70 promoter predicted tttgcaccaaaggtgtctctttaatgt -35 tttgca -10 taatgt Enterobacteria phage P1 p2Lxr promoter Enterobacteria phage P1 sigma 70 promoter predicted ttcacctcaataatactgttcatttatacagt -35 ggtgaa -10 actgta Enterobacteria phage P1 pPhd promoter Enterobacteria phage P1 sigma 70 promoter experimental DNase1 footprinting EMSA - gel shift tggtgctttatgcctgtgaagtttataat -35 tggtgc -10 tataat Enterobacteria phage P1 tAsDoc terminator Rho-independent transcriptional terminator predicted gccgtagcggc stem_1 cggc stem_2 gccg Enterobacteria phage P1 oLpa operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 pLpa promoter Enterobacteria phage P1 sigma 70 promoter experimental EMSA - gel shift Primer extension ttgctatttctttaatcgagggtattatattccacg -35 ttgcta -10 tattat +1 g Enterobacteria phage P1 tLpa terminator Rho-independent transcriptional terminator predicted gcccgttccgggc stem_1 gcccg stem_2 cgggc Enterobacteria phage P1 LpPac promoter Enterobacteria phage P1 late promoter experimental Promoter probe vectors atgtgactttcgttaccct -22 atgtgactt -10 taccct Enterobacteria phage P1 pPacB promoter Enterobacteria phage P1 sigma 70 promoter predicted ccgatatcgtcgatacaggtggttatggt -35 ccgata -10 tatggt Enterobacteria phage P1 tPacB terminator Rho-independent transcriptional terminator predicted ccgtgtacgcgcatacgg stem_1 ccgtgt stem_2 atacgg Enterobacteria phage P1 pC1 promoter Enterobacteria phage P1 sigma 70 promoter experimental DNase1 footprinting EMSA - gel shift tctattattttcgttggatccttctataatggtggcca -35 aataga -10 attata +1 tg Enterobacteria phage P1 oClabB operator C1-controlled operator of P1 phage experimental taa Enterobacteria phage P1 oClabA operator C1-controlled operator of P1 phage experimental tgcactaa Enterobacteria phage P1 oC1c operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p1Coi promoter Enterobacteria phage P1 sigma 70 promoter experimental Primer extension ttgacaattgctctaataaattatagttttgccgccg -35 tgtcaa -10 aaaact +1 c Enterobacteria phage P1 oCoi operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 oCre operator C1-controlled operator of P1 phage experimental tgctctaa Enterobacteria phage P1 p4Cre promoter Enterobacteria phage P1 sigma 70 promoter experimental Promoter probe vectors ttgatttttatgcgcagctggacgtaaactcctcttca -35 ttgatt -10 taaact +1 ca Enterobacteria phage Mu O1 operator Mu phage operator O1 experimental cttttcagtattattcttttctataaagttacttttcaaaa O_1 cttttcagta O_2 cttttctata O_3 cttttcaaaa Enterobacteria phage Mu O2 operator Mu phage operator O2 experimental taccaaaaagcagctttacaaaaagcttttcagtaattatctttttagtaa O_1 tttttggta O_2 tttttgtaaa O_3 cttttcagtaa O_4 ctttttagtaa Enterobacteria phage Mu pE promoter Mu phage early promoter for transposase and replication experimental DNase1 footprinting S1 mapping tttacaaaaagcttttcagtaattatctttttagta -35 tttaca -10 tatctt +1 a Enterobacteria phage Mu O3 operator Mu phage operator O3 experimental cttagttaaattgctaactttatagat O_1 cttagttaaa O_2 ctttatagat Enterobacteria phage Mu pCM promoter Mu phage promoter of repressor gene experimental DNase1 footprinting S1 mapping tttaaaaaccctcctaagttttgtaatctataaa -35 tttaaa -10 attaca +1 t Enterobacteria phage Mu pGEM promoter Mu phage promoter of the gem operon experimental Primer extension ttattttccataaaatcctctctgattgatgtgtaaattcaggcggtgttgcagcaccgccccctttc -35 taaaat -10 taaatt +1 c -44 ttatttt Enterobacteria phage Mu t9.2 terminator Mu phage transcriptional terminator of early genes experimental aaagccggttaatccggcttt stem_1 aaagccgg stem_2 ccggcttt Enterobacteria phage Mu pM promoter Mu phage middle promoter experimental DNase1 footprinting Linker scanning mutations Promoter probe vectors S1 mapping tccggctttttttacgtcctcaatatcctgtgatgaa -35 tccggc -10 tatcct +1 a Enterobacteria phage Mu tM terminator Mu phage transcriptional terminator of middle operon experimental aaataaccggcatcctgccggttattt stem_1 aaataaccggc stem_2 gccggttattt Enterobacteria phage Mu pLyz promoter Mu phage promoter of late genes experimental Promoter probe vectors S1 mapping ccataatcccgcacctgccacctgattttttagactgccatcag -35 ccataatcccgcac -10 tagact +1 ag Enterobacteria phage Mu tLys(a) terminator Mu phage transcriptional terminator of late genes experimental taaaccggtatttaacggtgtatgaatcccgtttta stem_1 taaaccggtattta stem_2 tgaatcccgtttta Enterobacteria phage Mu tLys(b) terminator Mu phage transcriptional terminator of late genes experimental aacggtgtatgaatcccgtt stem_1 aacgg stem_2 ccgtt Enterobacteria phage Mu pI promoter Mu phage promoter of late genes experimental Promoter probe vectors S1 mapping gcataaccccagattttcccgcacctcccgcaaactgactgctca -35 gcataaccccagat -10 caaact +1 gctc Enterobacteria phage Mu pP promoter Mu phage promoter of late genes experimental Promoter probe vectors S1 mapping ccataaccccggacggcggcttttcacaggtatccttttcagaca -35 ccataaccccggac -10 tatcct +1 a +1 a Enterobacteria phage Mu tP(G+) terminator Mu phage transcriptional terminator in G segment experimental aaggcccgatagcgggcctt stem_1 aaggcccg stem_2 cgggcctt Enterobacteria phage Mu tP(G-) terminator Mu phage transcriptional terminator in G segment experimental aaggcccgctatcgggcctt stem_1 aaggcccg stem_2 cgggcctt Enterobacteria phage Mu pMom promoter Mu phage promoter of late genes experimental Promoter probe vectors S1 mapping caataaccacactcaacccatgatgttttttaagatagtggcga -35 caataaccacactc -10 taagat +1 ga Enterobacteria phage Mu tMom terminator Mu phage transcriptional terminator of mom operon experimental aagcgcgaaagctaaagttttcgcattt stem_1 aagcgcgaaagc stem_2 gttttcgcattt Staphylococcus aureus phage phiP68 PR1 promoter Staphylococcus aureus phage phiP68 PR1 promoter predicted ttgacaaaacttttaaacgtttgctatact -10 tatact -35 ttgaca Staphylococcus aureus phage phiP68 PR2 promoter Staphylococcus aureus phage phiP68 PR2 promoter predicted tttacgttttttagaaaggagtgatataat -10 tataat -35 tttacg Staphylococcus aureus phage phiP68 T1 terminator Staphylococcus aureus phage phiP68 T1 transcriptional terminator predicted tcattttaatacaatttcataggggatacttatcccctattttttatgaggtgtttaaat Staphylococcus aureus phage phiP68 PR3 promoter Staphylococcus aureus phage phiP68 PR3 promoter predicted atgaagatgtgaggtataactttttatatt -10 tatatt -35 atgaag Staphylococcus aureus phage phiP68 T2 terminator Staphylococcus aureus phage phiP68 T2 transcriptional terminator predicted aacatgatgaaataaaaaaaggcaactgttaaaataacagtcgccttttctttttgagat Staphylococcus aureus phage phiP68 PL1 promoter Staphylococcus aureus phage phiP68 PL1 promoter predicted tttatttgtattaatgttcgttgatattat -10 ataata -35 aaataaa Staphylococcus aureus phage phiP68 PL2 promoter Staphylococcus aureus phage phiP68 PL2 promoter predicted gagttaaaacgatacaattaaaaggggtat -10 ataccc Staphylococcus aureus phage phiP68 PL3 promoter Staphylococcus aureus phage phiP68 PL3 promoter predicted ttccttggggggtgttctcataatgggtat -10 ataccc Staphylococcus aureus phage phiP68 PL4 promoter Staphylococcus aureus phage phiP68 PL4 promoter predicted acgtgataactttaaagagcctgagggtat -10 ataccc Staphylococcus aureus phage phiP68 PL5 promoter Staphylococcus aureus phage phiP68 PL5 promoter predicted tttacttatttaaatattctatgatataat -10 attata -35 agtaaa Enterobacteria phage lambda tI terminator Lambda phage rho-independent tI terminator experimental N/A attagcgcaaggtgatttttgtcttcttgcgctaat stem_1 attagcgcaag stem_2 cttgcgctaat Enterobacteria phage lambda attP att site Enterobacteria phage lambda attachment site experimental tacgtttctcgttcagcttttttatactaagttggcattataaaaaa Enterobacteria phage lambda PI promoter Lambda phage pI promoter experimental Primer extension ttgcgtgtaattgcggagactttgcgatgtact -35 gcaattacacgcaa -10 agtaca Enterobacteria phage lambda tL3 terminator Lambda phage rho-independent tL3 terminator experimental aggctgggtatttcccggcct stem_1 cccagcct stem_2 aggccggg Enterobacteria phage lambda tL2 terminator Lambda phage rho-independent tL2 terminator experimental gccctccagtgtgagggc stem_1 gagggc stem_2 gccctc Enterobacteria phage lambda PsieB promoter Promoter of superinfection exclusion gene (sieB) experimental Linker scanning mutations RNase protection assay tgtacccctacagcgagaaatcggataaact -35 tgtacc -10 taaact Enterobacteria phage lambda tL1 terminator Phage lambda rho-dependent tL1 terminator experimental gttatctgggcttaaaagcagaagtccaacccagataac stem_1 tttaagcccagataac stem_2 gttatctgggttgga Enterobacteria phage lambda PL1 promoter Lambda phage left L1 promoter experimental EMSA - gel shift Promoter probe vectors ttgacataaataccactggcggtgatactgagcaca -35 tgtcaa -10 agtatc +1 t Enterobacteria phage lambda OL operator Lambda phage left operator region experimental tatcaccgccagtggtatttatgtcaacaccgccagagataatttatcaccgcagatggtt O_1 tatcaccgccagtggta O_2 caacaccgccagagata O_3 tatcaccgcagatggtt Enterobacteria phage lambda PL2 promoter Lambda phage left L2 promoter experimental EMSA - gel shift Promoter probe vectors tacagataaccatctgcggtgataaattatctctg -35 tctgta -10 aattta +1 c Enterobacteria phage lambda PRM promoter Lambda phage pRM promoter experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors tagatatttatcccttgcggtgatagatttaacgta -35 tatcta -10 aatcta +1 t Enterobacteria phage lambda OR operator Lambda phage right operator region experimental tatcaccgcaagggataaatatctaacaccgtgcgtgttgactattttacctctggcggtgata O_3 tatcaccgcaagggata O_2 taacaccgtgcgtgttg O_1 tacctctggcggtgata Enterobacteria phage lambda PR promoter Lambda phage right pR promoter experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors ttgactattttacctctggcggtgataatggttgca -35 ttgacta -10 gataat +1 a Enterobacteria phage lambda tR1 terminator Lambda phage rho-dependent tR1 terminator experimental tgtatgcatttatttgcataca stem_1 tgtatgca stem_2 tgcataca Enterobacteria phage lambda PRE promoter Lambda phage pRE promoter experimental DNase1 footprinting Linker scanning mutations gtttgtttgcacgaaccatatgtaagtatttcctta -35 acaaac -10 atactt +1 t Enterobacteria phage lambda tO terminator Transcriptional terminator of OOP anti-sense RNA experimental agaacgctcggttgccgccgggcgtttt stem_1 accgagcgttct stem_2 aaaacgcccggc Enterobacteria phage lambda POop promoter Promoter of RNA OOP (anti-sense RNA to cII RNA) experimental Promoter probe vectors cataat -10 attatg Enterobacteria phage lambda tR2 terminator Lambda phage rho-independent tR2 temrinator experimental aggcctgctggtaatcgcaggcct stem_1 aggcctgc stem_2 gcaggcct Enterobacteria phage lambda PaQ promoter Lambda phage Paq promoter experimental Linker scanning mutations gagcacttgcagtacctttgccttagtatttccttcaa -35 gtgctc -10 atacta +1 t Enterobacteria phage lambda PR' promoter Lambda phage pR' promoter experimental Promoter probe vectors ttgacttattgaataaaattgggtaaatttgactcaa -35 ttgact -10 taaatt +1 a Enterobacteria phage lambda tR' terminator Lambda phage rho-independent tR' terminator experimental N/A cccgaaacagttcgcaggtaatagttagagcctgcataacggtttcggg stem_1 cccgaaacagttcgcagg stem_2 cctgcataacggtttcggg Bacteriophage 933W pL promoter 933W phage pL promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ttgataatgtcgaactattggttcattattatcgtcg -35 ttatcaa -10 ataatg +1 c Bacteriophage 933W OL operator 933W phage OL region experimental atgaaccaatagttcgacattatcaagaactattggtacg O_1 atgaaccaatagttcg O_2 aagaactattggtacg Bacteriophage 933W OR operator 933W phage OR operator experimental tgaaccatgagtacgatactaaagcacttgcaaaaactttcagttcaaccataatacgtactgaaagtacg O_1 cgtactgaaagtacg O_2 aaaactttcagttca O_3 tgaaccatgagtacg Bacteriophage 933W pRM promoter 933W phage pRM promoter experimental DNase1 footprinting EMSA - gel shift Primer extension tgaaagtttttgcaagtgctttagtatcgtactca -35 ctttca -10 atacta +1 t Bacteriophage 933W pR promoter 933W phage pR promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ttgcaaaaactttcagttcaaccataatacgtactga -35 ttgcaa -10 cataat +1 a Bacillus phage Nf A1 promoter Bacillus phage Nf early promoter experimental ttgacatttgatagaatttatggtataat -35 tgtcaa -10 attata Bacillus phage Nf TA1 terminator Bacillus phage Nf terminator of transcription experimental acgtggtgtctaacggtgatgccacgt stem_1 gacaccacgt stem_2 acgtggcatc Bacillus phage Nf A2c promoter Bacillus phage Nf early promoter experimental DNase1 footprinting Promoter probe vectors ttgaaaaatgttgaacagcatgatatactaaaagag -35 tttcaa -10 agtata +1 c Bacillus phage Nf A2b promoter Bacillus phage Nf early promoter experimental DNase1 footprinting Promoter probe vectors ttgcattttgtttaacatcaccttagaataatgagtg -35 aatgcaa -10 attcta +1 c Bacillus phage Nf A3 promoter Bacilllus phage Nf late promoter experimental DNase1 footprinting Promoter probe vectors gcataacaccatgaataccaagggtttccgtgatataataaaatag -10 tataat +1 g Bacillus phage Nf TD1 terminator Bacillus phage Nf terminator of transcription experimental acctgctgttataataacggc Bacillus phage Nf C1A promoter Bacillus phage Nf early promoter experimental ttgacaaacacatgcggaaacagggatataaa -35 tgtcaa -10 tttata Bacillus phage Nf C2 promoter Bacillus phage Nf early promoter experimental tagacaaccagactataaaatgttatact -35 agtata -10 tgtcta Enterobacteria phage P21 oL operator P21 phage oL region experimental atttaagacttcttaatttattggtcaagtgcatttttgaagaaaacttaattttatgggcgtgaatttagtttgtctttga O_1 atttaagacttcttaatt O_2 tttgaagaaaacttaatt O_3 aatttagtttgtctttga Enterobacteria phage P21 oR operator P21 phage oR region experimental agttaagacctcttaaataaacttgacttaagattcctttggtggataatttaagtgttctttaat O_3 agttaagacctcttaaat O_2 acttaagattcctttggt O_1 atttaagtgttctttaat Bacteriophage phi105 pM promoter Bacteriophage phi105 pM promoter experimental Promoter probe vectors S1 mapping ttgtatttccgacattcggatactataattgtgtca -35 atacaa -10 attata +1 t Bacteriophage phi105 oR operator Bacteriophage phi105 right operator region experimental gacggaaatacaagtattttttagtaaattgacggaaatacaagataaatactctctgaatctttaaaatgcttgaatttcgtcaaatttcgacttttacaaaatgtcgtgaataccatacaatttagacataccttaacgggaggtgataatcatgctggatgggaaaaagcttaagcttggggctttaattaaggacaaaagaaaagaaaagcacttgaaacagacagaaatggcgaaggcactgggtatgtccagaacttatctctctgatatcgaaaacggcagatatctgccgagtacaaaaacactttccagaatagcgattttaataaatctggatttaaatgtgttaaaaatgacggaaatacaag O_1 gacggaaatacaag O_2 gacggaaatacaag O_3 gacggaaatacaag Bacteriophage phi105 pR promoter Bacteriophage phi105 pR promoter experimental Promoter probe vectors S1 mapping tttacaaaatgtcgtgaataccatacaatttagaca -35 tttaca -10 tacaat +1 a Actinophage RP3 AttP att site Actinophage RP3 attachment site attP core region experimental agagcaccgctctcctaaagcgggtgtcgcaggttcgaatcctgccgggggcac Enterobacteria phage phi80 AttP att site Phage phi80 AttP region experimental agaacactttcttaaat Enterobacteria phage P22 attP att site Enterobacteria phage P22 attachment site experimental tgtttcaggataatctggctaccgccatgcgccgtgacggagagatt Enterobacteria phage P22 T11 terminator Enterobacteria phage P22 rho-independent terminator predicted gccggagtgacccggc stem_1 gccgg stem_2 ccggc Enterobacteria phage P22 T12 terminator Enterobacteria phage P22 rho-independent terminator predicted gccgggtcactccggc stem_1 ccggc stem_2 gccgg Enterobacteria phage P22 Pant promoter Enterobacteria phage P22 Pant promoter experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors ttgacatgatagaagcactctactatatt -35 ttgaca -10 tatatt Enterobacteria phage P22 Pmnt promoter Enterobacteria phage P22 Pmnt promoter experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors ttgagaatatagtagagtgcttctatcat -35 tctcaa -10 atgata Enterobacteria phage P22 Psar promoter experimental gtgttaactgcttctaaaattgctatactattcatg -35 taacac -10 agtata +1 c Enterobacteria phage P22 T13 terminator Enterobacteria phage P22 rho-independent terminator predicted cccagcttcggctggg stem_1 cccagc stem_2 gctggg Enterobacteria phage P22 T14 terminator Enterobacteria phage P22 rho-independent terminator predicted ccgtagccatgctgcgg stem_1 ccgtagc stem_2 gctgcgg Enterobacteria phage P22 T15 terminator Enterobacteria phage P22 rho-independent terminator predicted ccgcagcatggctacgg stem_1 gctgcgg stem_2 ccgtagc Enterobacteria phage P22 T16 terminator Enterobacteria phage P22 rho-independent terminator predicted cccgcattgccggg stem_1 cccg stem_2 cggg Enterobacteria phage P22 T1 terminator Enterobacteria phage P22 rho-independent terminator predicted ttgatcgttgttaccgatcaa stem_1 ttgatcg stem_2 cgatcaa Enterobacteria phage P22 T2 terminator Enterobacteria phage P22 rho-independent terminator predicted ccgccatcaggcgg stem_1 ccgcc stem_2 ggcgg Enterobacteria phage P22 T3 terminator Enterobacteria phage P22 rho-independent terminator predicted ccgcctgatggcgg stem_1 ggcgg stem_2 ccgcc Enterobacteria phage P22 T4 terminator Enterobacteria phage P22 rho-independent terminator predicted gccgcactcaggcggc stem_1 gccgc stem_2 gcggc Enterobacteria phage P22 T5 terminator Enterobacteria phage P22 rho-independent terminator predicted gccgcctgagtgcggc stem_1 gcggc stem_2 gccgc Enterobacteria phage P22 T6 terminator Enterobacteria phage P22 rho-independent terminator predicted tgccgctctatatgggcggca stem_1 gagcggca stem_2 tgccgccc Enterobacteria phage P22 PsieB promoter Enterobacteria phage P22 PsieB promoter experimental RNase protection assay tgtacccctacagcgagaaatcggataaact -10 tgtacc -35 taaact Enterobacteria phage P22 Pl promoter Enterobacteria phage P22 Pl promoter experimental N/A ttgaccatttaattaagaagtcttaaatt Enterobacteria phage P22 OL operator Enterobacteria phage P22 left operator region experimental atttaagacttcttaattaaatggtcaagtgtatttttgaagaaaacttaaatattttatcgttacttaagtttttatttga O_1 atttaagacttcttaatt O_2 tttgaagaaaacttaaat O_3 acttaagtttttatttga Enterobacteria phage P22 OR operator Enterobacteria phage P22 right operator region experimental agttaagtcatcttaaataaacttgactaaagattcctttagtagataatttaagtgttctttaat O_3 agttaagtcatcttaaat O_2 actaaagattcctttagt O_1 atttaagtgttctttaat Enterobacteria phage P22 Pr promoter experimental N/A atcttaaataaacttgactaaagattcct Enterobacteria phage P22 T7 terminator Enterobacteria phage P22 rho-independent terminator predicted tcgctttcacagcgg stem_1 agcga stem_2 ccgct Enterobacteria phage P22 Plate promoter promoter of late operon transcription experimental N/A ttgactttttgaataaagttgggtaaatt Enterobacteria phage P22 T8 terminator Enterobacteria phage P22 rho-independent terminator predicted gcctcgcagatgcggggc stem_1 gcctcgc stem_2 gcggggc Enterobacteria phage P22 T9 terminator Enterobacteria phage P22 rho-independent terminator predicted gccgcttacttagcggc stem_1 gccgc stem_2 gcggc Enterobacteria phage P22 T10 terminator Enterobacteria phage P22 rho-independent terminator predicted gccgctaagtaagcggc stem_1 agcggc stem_2 gccgct Enterobacteria phage HK022 pL promoter Enterobacteria phage HK022 left promoter experimental Linker scanning mutations Primer extension Promoter probe vectors tttacattaatgaactttaagtacatcataagccca -35 tgtaaa -10 atgatg +1 t Enterobacteria phage HK022 oL operator Enterobacteria phage HK022 left operator experimental tgtacttaaagttcattaatgtaaagtaccaatagtacattttatgggtataaaaagctcactacatcataagttagtgaactttaaggaa O_1 tgtacttaaagttca O_2 agtaccaatagtaca O_3 tgaactttaaggaa Enterobacteria phage HK022 oR operator Enterobacteria phage HK022 right operator experimental tgaaccataagttcaactatattaggtattgactgtactatcagttccgtcataatatgaaccataagttca O_1 tgaaccataagttca O_2 tgtactatcagttcc O_3 tgaaccataagttca Enterobacteria phage HK022 pRM promoter Enterobacteria phage HK022 pRM promoter experimental Linker scanning mutations Primer extension Promoter probe vectors tatagttgaactta +1 t -10 actata Enterobacteria phage HK022 pR promoter Enterobacteria phage HK022 right promoter experimental Linker scanning mutations Primer extension Promoter probe vectors ttgactgtactatcagttccgtcataatatgaacca -35 ttgact -10 cataat +1 a +1 aa Streptomyces phage phiC31 CIR8 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 CIR10 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 CIR11 operator Streptomyces phage phiC31 palindromic operator site experimental cgtactcacgtgagtag Streptomyces phage phiC31 CIR12 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 lp2 promoter Streptomyces phage phiC31 late promoter predicted ggttgccgactcccttc Streptomyces phage phiC31 CIR9 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 Ep_k promoter Streptomyces phage phiC31 early promoter experimental Primer extension Promoter probe vectors S1 mapping tcaggttgccgactcccttca Streptomyces phage phiC31 CIR1 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 cp1 promoter Streptomyces phage phiC31 immediate early promoter predicted tagggtgagcg -10 tagggt +1 g Streptomyces phage phiC31 CIR2 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 cp2 promoter Streptomyces phage phiC31 immediate early promoter experimental Promoter probe vectors S1 mapping tagagtcggctacg -10 tagagt +1 g Streptomyces phage phiC31 Ep_a promoter Streptomyces phage phiC31 early promoter experimental Promoter probe vectors S1 mapping ccgggttgcccactgccttca Streptomyces phage phiC31 Ep_b promoter Streptomyces phage phiC31 early promoter experimental Promoter probe vectors S1 mapping gcgggttgccgactcccttac Streptomyces phage phiC31 Ep_c promoter Streptomyces phage phiC31 early promoter experimental Promoter probe vectors S1 mapping ccgggttgccgacgtccttca Streptomyces phage phiC31 etB terminator Streptomyces phage phiC31 rho-independent transcriptional terminator experimental gacacacgccccgggcggagcaatgcgcttcgtgccggggcttgtc stem_1 gacacacgccccgggcggagc stem_2 gcttcgtgccggggcttgtc Streptomyces phage phiC31 CIR3 operator Streptomyces phage phiC31 palindromic operator site experimental cgtactcacgtgagtag Streptomyces phage phiC31 Ep_d promoter Streptomyces phage phiC31 early promoter experimental Primer extension Promoter probe vectors S1 mapping ccgggttgccgactcccttac Streptomyces phage phiC31 etC terminator Streptomyces rho-independent transcriptional terminator experimental cctaggcgccctcaacctactcacgtgagtagcttgggggcgcttcgg stem_1 cctaggcgccctcaacctactc stem_2 gagtagcttgggggcgcttcgg Streptomyces phage phiC31 CIR4 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 Ep_e promoter Streptomyces phage phiC31 early promoter experimental Primer extension Promoter probe vectors S1 mapping ccgggttgccgactcccttac Streptomyces phage phiC31 CIR5 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 etA terminator Streptomyces phage phiC31 rho-independent transcriptional terminator experimental tgacaccccacctaagccccgttaccgatgaaccttcggtaacggggcttctgtca stem_1 tgacaccccacctaagccccgttaccga stem_2 tcggtaacggggcttctgtca Streptomyces phage phiC31 CIR6 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 ap1 promoter Streptomyces phage phiC31 immediate early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors tacgttcgttgag -10 tacgtt +1 g Streptomyces phage phiC31 Ep_f promoter Streptomyces phage phiC31 early promoter experimental Primer extension Promoter probe vectors S1 mapping ccgggttgccgacttccttac Streptomyces phage phiC31 Ep_h promoter Streptomyces phage phiC31 early promoter experimental DNase1 footprinting Primer extension Promoter probe vectors S1 mapping ccgggttgccgacttccttac Streptomyces phage phiC31 CIR16 operator Streptomyces phage phiC31 palindromic operator site experimental cctactgagccgaagg Streptomyces phage phiC31 CIR13 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 CIR14 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 CIR15 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Streptomyces phage phiC31 Ep_j promoter Streptomyces phage phiC31 early promoter experimental ccgggttgccgactcccttac Streptomyces phage phiC31 Pint promoter Streptomyces phage phiC31 early promoter experimental Promoter probe vectors S1 mapping ctggctcgcccactgccttca Streptomyces phage phiC31 attP att site Streptomyces phage phiC31 attachment site experimental gttttcccaggtcagaagcggttttcgggagtagtgccccaactggggtaacctttgagttctctcagttgggggcgtagggtcgccgacatgacacaaggggttgtgaccggggt Streptomyces phage phiC31 lp1 promoter Streptomyces phage phiC31 late promoter experimental Primer extension Promoter probe vectors S1 mapping tcaggttgccgacaaccttca Streptomyces phage phiC31 CIR7 operator Streptomyces phage phiC31 palindromic operator site experimental cctactcacgtgagtag Bacteriophage VT2-Sa pL promoter phage VT2-Sa pL promoter predicted ttgaccaagtgaagtacatatcgtactat -10 atagta -35 ggtcaa Bacteriophage VT2-Sa ORL operator phage VT2-Sa left operator region experimental tagtacgatatgtacttcacttggtcaatacaatttgttctaaaacggggcgtttttttacaacgctttgtattt O_1 tagtacgatatgtactt O_2 caatacaatttgttcta O_3 tacaacgctttgtattt Bacteriophage VT2-Sa pRM promoter phage VT2-Sa pRM promoter predicted tggatggttccagtacagagcgtaataat -10 attatt -35 catcca Bacteriophage VT2-Sa ORR operator phage VT2-Sa right operator region experimental tattacgctctgtactggaaccatccatgcacaatgtgtatttttacttgtatttgagaagtacatattgtattt O_1 aagtacatattgtattt O_2 atgcacaatgtgtattt O_3 tattacgctctgtactg Bacteriophage VT2-Sa pR promoter phage VT2-Sa pR promoter predicted ttgtatttgagaagtacatattgtatttt -10 tatttt -35 ttgtat Bacteriophage VT2-Sa pRE promoter phage VT2-Sa pRE promoter predicted tgtaacttgtttgttccatttcttaagat -10 atctta -35 gttaca Stx1 converting bacteriophage pL promoter Stx1 converting bacteriophage pL promoter predicted tgaccaagtgaagtacatatcgtactat -35 ggtca -10 atagta Stx1 converting bacteriophage OL operator Stx1 converting bacteriophage left operator region predicted tagtacgatatgtacttcacttggtcaatacaatttgttctaaaacggggcgtttttttacaacgctttgtattt O_1 tagtacgatatgtactt O_2 caatacaatttgttcta O_3 tacaacgctttgtattt Stx1 converting bacteriophage pRM promoter Stx1 converting bacteriophage pRM promoter predicted tggatggttccagtacagagcgtaataataaggacatga -10 tcatgtccttattatt -35 catcca Stx1 converting bacteriophage OR operator Stx1 converting bacteriophage right operator region predicted tattacgctctgtactggaaccatccatgcacaatgtgtatttttacttgtatttgagaagtacatattgtattt O_1 aagtacatattgtattt O_2 atgcacaatgtgtattt O_3 tattacgctctgtactg Stx1 converting bacteriophage pR promoter Stx1 converting bacteriophage pR promoter predicted cttgtatttgagaagtacatattgtattt -35 cttgta -10 attt Stx1 converting bacteriophage pAQ promoter Stx1 converting bacteriophage pAQ promoter predicted aatatttagaaaactaatagtgccatgtgcaa -35 aatatt -10 ttgcaca Stx1 converting bacteriophage tR terminator Putative rho-dependent terminator predicted gccagcctcccccagtggctggc Stx2 converting bacteriophage I OL operator Stx2 converting bacteriophage I left operator region predicted caatgatgatttcatgccagattttctaatagtgtaatattttcttacatcactgcttgaaaatgcttcttgaataacagc O_1 caatgatgatttcatgc O_2 tgtaatattttcttaca O_3 gcttcttgaataacagc Stx2 converting bacteriophage I pL promoter Stx2 converting bacteriophage I pL promoter predicted actattagaaaatctggcatgaaatcatcattg -10 caatga -35 atagt Stx2 converting bacteriophage I OR operator Stx2 converting bacteriophage I right operator region predicted gggcgaattctttgcgcactttttcattctgaaccatgagtacgatactaaagcacttgcaaaaactttcagttcaaccataa O_1 tttcagttcaaccataa O_2 atgagtacgatactaaa O_3 gggcgaattctttgcgc Stx2 converting bacteriophage I pRM promoter Stx2 converting bacteriophage I pRM promoter predicted cagaatgaaaaagtgcgcaaagaattcgc -10 gcgaatt -35 attctg Stx2 converting bacteriophage I pR promoter Stx2 converting bacteriophage I pR promoter predicted ttgcaaaaactttcagttcaaccataat -35 ttgcaa -10 cataat Stx2 converting bacteriophage I tR terminator Putative rho-dependent terminator predicted gccagcctcccccagtggctggc Stx2 converting bacteriophage II pL promoter Stx2 converting bacteriophage II pL promoter predicted tgaccaagtgaagtacatatcgtactat -10 atagta -35 ggtca Stx2 converting bacteriophage II OL operator Stx2 converting bacteriophage II right operator region predicted tagtacgatatgtacttcacttggtcaatacaatttgttctaaaacggggcgtttttttacaacgctttgtattt O_1 tagtacgatatgtactt O_2 caatacaatttgttcta O_3 tacaacgctttgtattt Stx2 converting bacteriophage II pRM promoter Stx2 converting bacteriophage II pRM promoter predicted tggatggttccagtacagagcgtaataataaggacatga -35 catcca -10 tcatgtccttattatt Stx2 converting bacteriophage II ORR operator Stx2 converting bacteriophage II right operator region predicted tattacgctctgtactggaaccatccatgcacaatgtgtatttttacttgtatttgagaagtacatattgtattt O_1 aagtacatattgtattt O_2 atgcacaatgtgtattt O_3 tattacgctctgtactg Stx2 converting bacteriophage II pR promoter Stx2 converting bacteriophage II pR promoter predicted cttgtatttgagaagtacatattgtattt -10 attt -35 cttgta Stx2 converting bacteriophage II tR terminator Putative rho-dependent terminator predicted gcgttgttagctcagccggacag Enterobacteria phage P2 tQ terminator putative rho-independent terminator for P operon predicted gccgcctgcgggcggctttttt Enterobacteria phage P2 pP promoter Enterobacteria phage P2 late promoter experimental Linker scanning mutations gcgaatcgcggggcgcgactcagtagccttgccgtg -35 attcgc -10 aggcta +1 c Enterobacteria phage P2 pO promoter Enterobacteria phage P2 late promoter experimental Linker scanning mutations tggcggaggatgcgcatcgtcgggaaactgatgccg -35 tggcgg -10 gaaact +1 g Enterobacteria phage P2 tO terminator putative rho-independent terminator for O operon predicted taaacattgagcggccatgctggtcgctcaatgttta Enterobacteria phage P2 pV promoter Enterobacteria phage P2 late promoter experimental Linker scanning mutations tagcataacttttatatattgtgcaatctcacatgca -35 tagcat -10 caatct +1 a Enterobacteria phage P2 tV terminator putative rho-independent terminator for V operon predicted gaatggcaagtgttttccactcgccatt Enterobacteria phage P2 pF promoter Enterobacteria phage P2 late promoter experimental Linker scanning mutations tagcctgacatctccggcgcaactgaaaataccactc -35 tagcct -10 gaaaat +1 c Enterobacteria phage P2 pOgr promoter Enterobacteria phage P2 late promoter experimental Promoter probe vectors S1 mapping ttgttttgtaaggataaattaactaaaat -35 ttgttt -10 taaaat +1 a Enterobacteria phage P2 togr terminator rho-independent terminator for ogr transcript and F operon experimental aaagcccctcagtcgaggggcttt stem_1 aaagcccctc stem_2 gaggggcttt Enterobacteria phage P2 pE promoter Enterobacteria phage P2 early promoter experimental Promoter probe vectors ttgacatggtgtttagatctcaatagtat -35 ttgaca -10 tagtat Enterobacteria phage P2 P2 operator operator Enterobacteria phage P2 operator experimental gtttagatctcaatagtatttagtttagat O_1 gtttagat O_2 gtttagat Enterobacteria phage P2 pC promoter Enterobacteria phage P2 repressor promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors atgaattgcgtttaatgtcttataat -35 attcat -10 attata Enterobacteria phage P2 t terminator putative rho-independent terminator predicted cgcacttaattgtgcggggcttcttttt Enterobacteria phage P2 pOLD promoter experimental Primer extension atgcacccttgaatgcaacgactataaaatgtaaaaaagcgtttc Enterobacteria phage P4 pgop promoter P4 promoter for transcription of gop and beta experimental S1 mapping ttgatggcactatcctgaaaaatatgcaaaaaatagat -35 ttgatg -10 tatgca +1 t Enterobacteria phage P4 tCII terminator Putative rho independent terminator of cII transcription predicted ctagggaaggctaaccttccctag stem_1 ccttccctag stem_2 ctagggaagg Enterobacteria phage P4 pcII promoter P4 promoter for transcription of cII experimental S1 mapping tggagtttttaattgttagttgctataataaaaatcaacg -35 actcca -10 attata +1 c Enterobacteria phage P4 pint promoter P4 promoter for integrase transcription experimental EMSA - gel shift Primer extension Promoter probe vectors ttgaaatccggatatcattgggggcataattgggggc -35 tttcaa -10 attatg +1 g Enterobacteria phage P4 talpha terminator Putative rho-independent terminator of transcription of alpha predicted gaccggcatctgccggtc stem_1 tgccggtc stem_2 gaccggca Enterobacteria phage P4 t151 terminator Enterobacteria phage P4 rho-independent terminator experimental atgtgcgtattcgcgcagggatacgcacgt stem_1 atacgcacat stem_2 acgtgcgtat Enterobacteria phage P4 timm terminator Enterobacteria phage P4 rho-dependent terminator experimental cccttaccccctcacaccctgaatttgtctttgtgtttgcggctgtccgtcgcgcagaccgtcatccccgtatctgtatgcttcgcaccgtcgc Enterobacteria phage P4 t4 terminator Enterobacteria phage P4 transcriptional terminator experimental gctgccatcatggctacaacccttaccccctcacaccctgaattt Enterobacteria phage P4 t1 terminator Enterobacteria phage P4 rho-independent terminator t1 experimental gacgcgccacgcgtc stem_1 cgcgtc stem_2 gacgcg Enterobacteria phage P4 pLE promoter Enterobacteria phage P4 early promoter experimental DNase1 footprinting EMSA - gel shift ttgcctttttccggcatttgcggatatagtttttcg -35 aggcaa -10 actata +1 c Enterobacteria phage P4 pLL promoter Enterobacteria phage P4 early promoter experimental DNase1 footprinting EMSA - gel shift ttgcgtctgctgaaaatattcacaaaataaagcgc -35 acgcaa -10 attttg +1 g Enterobacteria phage P4 psid promoter Enterobacteria phage P4 late promoter pSid experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors tcgtgttgttgtccggtgtacgtcacaattttctta -35 tcgtgt -10 cacaat +1 a Enterobacteria phage SP6 pC1 promoter Bacteriophage SP6 pC1 promoter predicted g +1 g Enterobacteria phage SP6 pC2 promoter Bacteriophage SP6 pC2 promoter predicted a +1 a Enterobacteria phage SP6 pC3 promoter Bacteriophage SP6 pC3 promoter predicted g +1 g Enterobacteria phage SP6 pC4 promoter Bacteriophage SP6 pC4 promoter predicted g +1 g Enterobacteria phage SP6 t1 terminator Bacteriophage SP6 t1 terminator predicted gtcagccttcgggctggc stem_1 gtcagcc stem_2 ggctggc Enterobacteria phage SP6 P1 promoter Bacteriophage SP6 P1 promoter predicted atttaagggacactatag +1 g Enterobacteria phage SP6 P2 promoter Bacteriophage SP6 P2 promoter predicted aattaggtgacactatag +1 g Enterobacteria phage SP6 P3 promoter Bacteriophage SP6 P3 promoter predicted tattacgtgacactatag +1 g Enterobacteria phage SP6 t2 terminator Bacteriophage SP6 t2 terminator predicted ggtcacttacgagtggcc stem_1 ggtcact stem_2 agtggcc Enterobacteria phage SP6 P4 promoter Bacteriophage SP6 P4 promoter predicted atttaggtgacactatag +1 g Enterobacteria phage SP6 P5 promoter Bacteriophage SP6 P5 promoter predicted aattaggtgacactatag +1 g Enterobacteria phage SP6 t3 terminator Bacteriophage SP6 t3 terminator predicted ccgatacagtatcgg stem_1 ccgatac stem_2 gtatcgg Enterobacteria phage SP6 P6 promoter Bacteriophage SP6 P6 promoter predicted atttaggggacactatag +1 g Enterobacteria phage SP6 t4 terminator Bacteriophage SP6 t4 terminator predicted gccctgtctgccttagtgtaggcagggtc stem_1 gccctgtctgcctta stem_2 taggcagggtc Enterobacteria phage SP6 P7 promoter Bacteriophage SP6 P7 promoter predicted atttaagtgacactatag +1 g Enterobacteria phage SP6 P8 promoter Bacteriophage SP6 P8 promoter predicted atttaggtgacactatag +1 g Enterobacteria phage SP6 t5 terminator Bacteriophage SP6 t5 terminator predicted ccctatctaccttgcgtaggtaggg stem_1 ccctatctacc stem_2 gcgtaggtaggg Enterobacteria phage SP6 t6 terminator Bacteriophage SP6 t6 terminator predicted gttgtctaacatgttggacagc stem_1 gttgtctaaca stem_2 tgttggacagc Enterobacteria phage SP6 P9 promoter Bacteriophage SP6 P9 promoter predicted aattaggggacactatag +1 g Enterobacteria phage SP6 P10 promoter Bacteriophage SP6 P10 promoter predicted atttaggtgacactatag +1 g Enterobacteria phage SP6 t7 terminator Bacteriophage SP6 t7 terminator predicted gcagcgcgttagcgctgctttc stem_1 gcagcgcg stem_2 gctgctttc Mycoplasma virus P1 P1 promoter Mycoplasma virus P1 promoter predicted gcatgatacaccaaggcaagttgttgctattttagcccctc -10 tatttta -35 gcatgataca +1 c Mycoplasma virus P1 Terminator terminator Mycoplasma virus P1 rho-independent transcription terminator predicted aaaatctccataatggagatttt stem_1 aaaatctcca stem_2 tggagatttt Mycoplasma virus P1 P2 promoter Mycoplasma virus P2 promoter predicted tgaaaaaaataattaataacatcaaatgattctttagcttt -10 taaagaa -35 atttttttca +1 a Mycoplasma virus P1 P3 promoter Mycoplasma virus P1 P3 promoter predicted gcatgatacaccaaggcaagttgttgctattttagcccctc -10 taaaata -35 tgtatcatgc +1 g Bacteriophage GA-1 TA4 terminator Bacteriophage GA-1 TA4 terminator experimental aaagagtcctcattttgagggcttttt stem_1 tgaggactcttt stem_2 aaaaagccctca Bacteriophage GA-1 A1c promoter Bacteriophage GA-1 A1c promoter experimental Primer extension ttgtaaatgatttcactatgtgatataataaagatag -35 ttacaa -10 attata +1 c Bacteriophage GA-1 TA3 terminator Bacteriophage GA-1 TA3 terminator experimental agagaaagggacactagaaatagtgtctttttcttt stem_1 tagtgtccctttctct stem_2 aaagaaaaagacactat Bacteriophage GA-1 A1b promoter Bacteriophage GA-1 A1b promoter experimental Primer extension ttgacttggagtttaaataatgctataataatattat -35 agtcaa -10 attata +1 a Bacteriophage GA-1 A1a promoter Bacteriophage GA-1 A1a promoter experimental Primer extension ttgacttcttttttatttcatagtatactagagatag -35 agtcaa -10 agtata +1 c Bacteriophage GA-1 TA2 terminator Bacteriophage GA-1 TA2 terminator experimental gaaaagaagttgatagtttctattgacttcttttt stem_1 ctatcaacttcttttc stem_2 aaaaagaagtcaatag Bacteriophage GA-1 TA1 terminator Bacteriophage GA-1 TA1 terminator experimental gaggtacgttatcacctgtgaaaatgggttggtgacgtacttt stem_1 tgataacgtacctc stem_2 aaagtacgtcacca Bacteriophage GA-1 A2c promoter Bacteriophage GA-1 A2c promoter experimental Primer extension ctagcatttaataaagagtgtgtaaaagaatgtg -35 tgctag -10 ctttta +1 c Bacteriophage GA-1 A2b promoter Bacteriophage GA-1 A2b promoter experimental Primer extension ttgtgtttttgttctagtggtgctattatttaatta -35 acacaa -10 ataata +1 t Bacteriophage GA-1 A3 promoter Bacteriophage GA-1 A3 promoter experimental Primer extension tataattaatcta -10 tataat +1 a Bacteriophage GA-1 TD1 terminator Bacteriophage GA-1 TD1 terminator experimental aagaccgcctttaaagggcggtttt stem_1 aagaccgccttt stem_2 aaagggcggtttt Bacteriophage GA-1 C1b promoter Bacteriophage GA-1 C1b promoter experimental Primer extension ttgacagaagagaaataatatagtatactaaagata -10 agtata -35 tgtcaa +1 t Bacteriophage GA-1 C2 promoter Bacteriophage GA-1 C2 promoter experimental Primer extension ttgactctcattgccaatctatgttatactataatta -10 agtata -35 agtcaa +1 t Streptococcus phage Cp-1 PE1 promoter Bacteriophage promoter experimental Primer extension ttgacaatcattttagtaaatgctataatggttata -35 ttgaca -10 tataat +1 a Streptococcus phage Cp-1 PE2 promoter Bacteriophage Cp-1 PE2 promoter experimental Primer extension ttgacaagcattttgagaaatgctataatagtatca -35 ttgaca -10 tataat +1 a Streptococcus phage Cp-1 PE3 promoter Bacteriophage Cp-1 PE3 promoter experimental Primer extension ttgctttctatttgaaaatgtggtaaacttaaata -35 ttgctt -10 taaact +1 a Streptococcus phage Cp-1 Terminator terminator Bacteriophage Cp-1 transcriptional terminator predicted actctcggtttaccgctcct stem_1 actctcggtt Streptococcus phage Cp-1 Terminator2 terminator Bacteriophage Cp-1 transcriptional terminator predicted gagccttcccaatcgggaaagctc Streptococcus phage Cp-1 PL1 promoter Bacteriophage Cp-1 PL1 promoter experimental Primer extension ttcatggcttgaaaagtcagttggttagaatgactcgcacca -35 ttcatg -10 tagaat +1 a Streptococcus phage Cp-1 PL2 promoter Bacteriophage Cp-1 PL2 promoter experimental Primer extension ttacaggtttatcatatcatacttgctttattttgtca -35 ttacag -10 tttatt +1 a Streptococcus phage Cp-1 PL3 promoter Bacteriophage Cp-1 PL3 promoter experimental Primer extension ttgaggaagcctaaaggctgaccaagggcgggcaatagcccg -35 ttgagg -10 ggcaat +1 g Streptococcus phage Cp-1 PL4 promoter Bacteriophage Cp-1 PL4 promoter experimental Primer extension ttcagatatttaatatatgtgataagctg -35 ttcaga -10 gataag +1 g Streptococcus phage Cp-1 PL5 promoter Bacteriophage Cp-1 PL5 promoter experimental Primer extension aggacaagaataagggagggtttcagccctccta -35 aggaca -10 tttcag +1 a Streptococcus phage Cp-1 PL6 promoter Bacteriophage Cp-1 PL6 promoter experimental Primer extension atggcagaagcaacagaaacgctaaaagcact -35 atggca -10 taaaag +1 t Streptococcus phage Cp-1 PL7 promoter Bacteriophage Cp-1 PL7 promoter experimental Primer extension aaaacaacccgaatttttaaaagtatgatataatgaaatag -35 aaaaca -10 tataat +1 g Streptococcus phage Cp-1 PL8 promoter Bacteriophage Cp-1 PL8 promoter experimental Primer extension ttgaccgcttattgtttagaagtggaacaggtggaagacggg -35 ttgacc -10 tggaac +1 g Streptococcus phage Cp-1 PL9 promoter Bacteriophage Cp-1 PL9 promoter experimental Primer extension tttacggagtttgtacttaaaaaatatgtttatttatg -35 tttacg -10 tatgtt +1 g Streptococcus phage Cp-1 PPR promoter Bacteriophage Cp-1 PPR promoter experimental Primer extension ttaagcgctcatttttaaaatagttctcatggacttct -35 ttaagc -10 tctcat +1 t Streptococcus phage Cp-1 PE5 promoter S. pneumoniae phage Cp-1 PE5 promoter experimental Primer extension ttgacaagcattttgagaaatgctataatggtatca -35 tgtcaa -10 attata +1 t Streptococcus phage Cp-1 PE4 promoter Bacteriophage Cp-1 PE4 promoter experimental Primer extension ttgacaatcattttataaaatgatacaatgtatata -10 attgta -35 tgtcaa +1 t Bacteriophage phiKMV Promoter1 promoter Bacteriophage phiKMV promoter predicted ttgacacgtgggcggcaggtctgtagagt -35 ttgaca -10 tagagt Bacteriophage phiKMV Promoter2 promoter Bacteriophage phiKMV promoter predicted ttgacacactaccaaggcatcggtagagt -35 ttgaca -10 tagagt Bacteriophage phiKMV Promoter3 promoter Bacteriophage phiKMV promoter predicted ctgacacggtgcagggcacgcggtacagt -35 ctgaca -10 tacagt Bacteriophage phiKMV Promoter4 promoter Bacteriophage phiKMV promoter predicted ttgacaagacaagcgcaagtctctaacat -35 ttgaca -10 taacat Bacteriophage phiKMV Tphi1 terminator Bacteriophage phiKMV terminator Tphi1 predicted ggcccggccctccgggcc stem_1 ggcccgg stem_2 ccgggcc Bacteriophage phiKMV Promoter5 promoter Bacteriophage phiKMV promoter predicted cgtctaagcgactggggcctactccggggtcaaatccg Bacteriophage phiKMV Promoter6 promoter Bacteriophage phiKMV promoter predicted cgcctgacgacccttccctactccggccttaaatctt Bacteriophage phiKMV Promoter7 promoter Bacteriophage phiKMV promoter predicted tatctaacgaccctgccctactccggccttaaactca Bacteriophage phiKMV Tphi2 terminator Bacteriophage phiKMV terminator Tphi2 predicted cccgcgcagattccctgcgtggg stem_1 cccgcgcag stem_2 ctgcgtggg Bacteriophage phiKMV Tphi3 terminator Bacteriophage phiKMV terminator Tphi3 predicted agtagttcaagccgagcacctgcatagtcgggtgctccactggaactact Enterobacteria phage HK620 pX promoter Enterobacteria phage HK620 pX promoter predicted ttgacagccgcactccatgacgggtaaaaa -35 tgtcaa -10 ttttta Enterobacteria phage HK620 attP att site Attachment site of Enterobacteria phage HK620 experimental atggtgtcccctgcag Enterobacteria phage HK620 pI promoter Enterobacteria phage HK620 pI promoter predicted ttgcctgatttgcaggttcgattccct -35 aggcaa -10 agggaa Enterobacteria phage HK620 tL3 terminator Enterobacteria phage HK620 tL3 terminator predicted aagaattgcttaagagaaattctt stem_1 agcaattctt stem_2 aagaatttct Enterobacteria phage HK620 tL2D terminator Enterobacteria phage HK620 tL2D terminator predicted aaacaactttgttt stem_1 ttgttt stem_2 aaacaa Enterobacteria phage HK620 tL2C terminator Enterobacteria phage HK620 tL2C terminator predicted atcgccacttttattggcgat stem_1 tggcgat stem_2 atcgcca Enterobacteria phage HK620 tL2B terminator Enterobacteria phage HK620 tL2B terminator predicted aacgcttcacgagaggcgtt stem_1 gaagcgtt stem_2 aacgcctc Enterobacteria phage HK620 tL2A terminator Enterobacteria phage HK620 tL2A terminator predicted gccctccaatgtgagggc stem_1 gagggc stem_2 gccctc Enterobacteria phage HK620 tL1 terminator Enterobacteria phage HK620 tL1 terminator predicted ttggtgtagatcaccaa stem_1 caccaa stem_2 ttggtg Enterobacteria phage HK620 pL promoter Enterobacteria phage HK620 pL promoter predicted tttacacaataaaatacctacagtattct -35 tgtaaa -10 agaata Enterobacteria phage HK620 OL operator Enterobacteria phage HK620 OL operator predicted gaatactgtaggtattttattgtgtaaatacccaaggtatttatttttgatgaaataatgataa O_1 gaatactgtaggtattt O_2 aaatacccaaggtattt O_3 tgatgaaataatgataa Enterobacteria phage HK620 tIMM terminator Enterobacteria phage HK620 tIMM terminator predicted aaataaatatcctttgtattcattt stem_1 tatttattt stem_2 aaatgaata Enterobacteria phage HK620 OR operator Enterobacteria phage HK620 OR operator predicted taatagctaaggtacttaaactaaaaataccctgagtattgattgctttgaatacctgtagtattc O_3 taatagctaaggtactt O_2 aaataccctgagtattg O_1 gaatacctgtagtattc Enterobacteria phage HK620 pR promoter Enterobacteria phage HK620 pR promoter predicted ttgattgctttgaatacctgtagtattct -35 ttgatt -10 tattct Enterobacteria phage HK620 tR1 terminator Enterobacteria phage HK620 tR1 terminator predicted gcgcataagttgatgcgc stem_1 gcgcat stem_2 atgcgc Enterobacteria phage HK620 pRE promoter Enterobacteria phage HK620 pRE promoter predicted ttgcgagtacttgtaagttgcatatgtaagtat -35 tcgcaa -10 atactt Enterobacteria phage HK620 tR2 terminator Enterobacteria phage HK620 tR2 terminator predicted ggcctgctggtaatcgcaggcc stem_1 ggcctgc stem_2 gcaggcc Enterobacteria phage HK620 pR' promoter Enterobacteria phage HK620 pR' promoter predicted ttgactttttgaataaagttgggtaaat -35 ttgact -10 taaat Enterobacteria phage HK620 tQ terminator Enterobacteria phage HK620 tQ terminator predicted tgggctacaaccctcagccca stem_1 tgggct stem_2 agccca Enterobacteria phage HK620 tGP5 terminator Putative enterobacteria phage HK620 tGP5 terminator predicted aaggggcttacgcccctt stem_1 aaggggc stem_2 gcccctt Enterobacteria phage HK620 tORF59A terminator Putative enterobacteria phage HK620 tORF59A terminator predicted aagccggagtgacccggctt stem_1 aagccgg stem_2 ccggctt Enterobacteria phage HK620 tMNT terminator Putative enterobacteria phage HK620 tMNT terminator predicted ccaccgtcaggtgg stem_1 ccacc stem_2 ggtgg Enterobacteria phage HK620 tANT terminator Putative enterobacteria phage HK620 tANT terminator predicted ccagcttcggctgg stem_1 ccagc stem_2 gctgg Enterobacteria phage HK620 tJ terminator Putative enterobacteria phage HK620 tJ terminator predicted tcaaataccgcggtatttga stem_1 tcaaataccg Enterobacteria phage HK620 tR' terminator Putative enterobacteria phage HK620 tR' terminator predicted gtaattgatattac stem_1 gtaat stem_2 attac Bacillus phage phi29 A1 promoter Bacteriophage phi-29 A1 promoter experimental Primer extension S1 mapping ttgacaactattacagagtatgctataatggtagta -35 tgtcaa -10 attata +1 t Bacillus phage phi29 A1 IV promoter Bacteriophage phi-29 A1 IV promoter experimental Primer extension S1 mapping ttgatatatgtttaggctacaaagggaaacgtaagata -35 tatcaa +1 t Bacillus phage phi29 TA1 terminator Bacteriophage phi29 TA1 terminator experimental acgtggcatctaacaccgatgtcacgt stem_1 gatgccacgt stem_2 acgtgacatc Bacillus phage phi29 A2c promoter Bacteriophage phi-29 A2c promoter experimental Primer extension S1 mapping ttgaaaattgtcgaacagggtgatataataaaagag -35 tttcaa -10 attata +1 c Bacillus phage phi29 A2b promoter Bacteriophage phi-29 A2b promoter experimental Primer extension S1 mapping ttgcaaaaagttatacaggtgtggttaaatagagaacg -35 ttgcaa -10 atttaa +1 c Bacillus phage phi29 A3 promoter Bacteriophage phi-29 A3 promoter experimental Primer extension S1 mapping gtatcaagggttcacgtggtataattaagtag -10 tataat +1 g Bacillus phage phi29 A2a promoter Bacteriophage phi-29 A2a promoter experimental Primer extension S1 mapping atggcatatgtttcacctctttctataatctattagtac -35 tgccat -10 attata +1 g Bacillus phage phi29 B1 promoter Bacteriophage phi-29 B1 promoter experimental Primer extension S1 mapping ttgttcattttctccaataatgttaaactttcatca -35 gaacaa -10 agttta +1 t Bacillus phage phi29 B2 promoter Bacteriophage phi-29 B2 promoter experimental Primer extension S1 mapping tacacacaaagccgtataaaccgtgtataataggggtaa -35 tgtgta -10 attata +1 t Bacillus phage phi29 TD1 terminator Bacteriophage phi29 TD1 terminator experimental agcctatcgtctgaggaacggtaggct stem_1 agcctatcgtc stem_2 gaacggtaggct Bacillus phage phi29 C1 promoter Bacteriophage phi-29 C1promoter experimental Primer extension S1 mapping tttacaaagtgaacaggaagtgttaaactatataga -35 tgtaaa -10 agttta +1 t Bacillus phage phi29 C2 promoter Bacteriophage phi-29 C2 promoter experimental Primer extension S1 mapping tagacaaactatcgtttaacatgttatactataatag -35 tgtcta -10 agtata +1 c Enterobacteria phage T4 PrIIB2 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping aatgcttcaaaaaacagtgataaaatggttgctg -35 tgaagcatt -10 atttta +1 c Enterobacteria phage T4 PrIIB1 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping gatgcttttgatgatgtagattatgataagtatg -35 aaaagcatc -10 atcata +1 c Enterobacteria phage T4 PrIIA promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting Primer extension cccgctttaaagatattagagataaaattcaatccg -35 taaagcggg -10 atttta +1 cg Enterobacteria phage T4 P2.3 promoter Enterobacteria phage T4 early promoter experimental Primer extension ttgataaagcagttcatcgagaatatagaatcattcaa -35 tatcaa -10 attcta +1 t Enterobacteria phage T4 P1.4-3.9 promoter Enterobacteria phage T4 early promoter experimental Primer extension Promoter probe vectors gtttactttaccacaaggatgtggtataat -35 agtaaac -10 attata Enterobacteria phage T4 P3.6 promoter Enterobacteria phage T4 early promoter experimental Primer extension Promoter probe vectors gtttactttcgagctaaatggcgatacaat -35 agtaaac -10 attgta Enterobacteria phage T4 P39 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping ttagctttatgattaccggagtataatattcccg -35 taaagctaa -10 attata +1 c Enterobacteria phage T4 t39.1 terminator Rho-independent transcriptional terminator predicted ggccttcgggcc stem_1 ggcc stem_2 ggcc Enterobacteria phage T4 P5.3/1 promoter Enterobacteria phage T4 early promoter predicted ttactaatattgaaatcactggatataattggttcg -35 tagtaa -10 attata Enterobacteria phage T4 P5.3/2 promoter Enterobacteria phage T4 early promoter predicted ttgtcttcaagtggttttactaatattgaaatcactgg -35 agacaa -10 tttcaa Enterobacteria phage T4 P5.3/3 promoter Enterobacteria phage T4 early promoter predicted ttgtcttcaagtggttttactaatattgaaatc -35 agacaa -10 atatta Enterobacteria phage T4 Pcef promoter experimental DNase1 footprinting EMSA - gel shift Primer extension atatacatcagtagttgattatggtactatatcaata -35 tgtatat -10 atagta +1 t Enterobacteria phage T4 PmotB promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension gtttacaaactcttgggaccagagtataatggtcccg -35 tgtaaac -10 attata +1 c Enterobacteria phage T4 P8.1 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacttcctcggttagttgtggtactat -35 agtaaac -10 atagta Enterobacteria phage T4 P11.5 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacaagttaaagtaaaaatgttatagt -35 tgtaaac -10 actata Enterobacteria phage T4 PmodB promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors gtttactttcctttctaacgatgatatgatagcttct -35 agtaaac -10 atcata +1 a Enterobacteria phage T4 Pmrh.2 promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension gtttactttccaaaatgagtatggtataatagaatta -35 agtaaac -10 attata +1 t Enterobacteria phage T4 tsoc terminator Rho-independent transcriptional terminator predicted ggactccttcgggagtcc stem_1 ggagtcc stem_2 ggactcc Enterobacteria phage T4 Psoc promoter Enterobacteria phage T4 late promoter experimental N/A ttacttattcagaaaagaagatgtataaata -10 tatttata Enterobacteria phage T4 Psoc(w2) promoter Enterobacteria phage T4 late promoter experimental N/A catttattgtaaatccatataatgataaata -10 tatttatc Enterobacteria phage T4 P16.0 promoter Enterobacteria phage T4 early promoter experimental Run-off transcription assay ttgtggatatatttcatttcgtattaaata -35 ccacaa -10 tattta Enterobacteria phage T4 Psoc(w1) promoter Enterobacteria phage T4 late promoter experimental N/A cttgtggatatatttcatttcgtattaaata -10 tatttaat Enterobacteria phage T4 P56/69 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping attgcttacatactcaaatgatataattatttaa -35 tgtaagcaat -10 attata +1 tt Enterobacteria phage T4 P16.8 REV promoter Enterobacteria phage T4 early promoter experimental Run-off transcription assay ttcatcttctgaccaaaatttattataat -35 ttcatc -10 tataat Enterobacteria phage T4 P16.8 promoter Enterobacteria phage T4 early promoter experimental Run-off transcription assay gtgataaaataatctttagttcattgcat -35 ttatcac -10 atgcaa Enterobacteria phage T4 P17.4 promoter Enterobacteria phage T4 early promoter experimental Run-off transcription assay ttaatatttatcgcaaaacgtgttagtat -35 tattaa -10 atacta Enterobacteria phage T4 P17.7 promoter Enterobacteria phage T4 early promoter experimental Run-off transcription assay tggaaatcaaaagatgttaatgatatgat -35 tttcca -10 atcata Enterobacteria phage T4 P61 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting Primer extension aatgcttttatgaatagaggttaatatgaaaaca -35 aaaagcatt -10 atatta +1 t Enterobacteria phage T4 P19.8 promoter Enterobacteria phage T4 early promoter experimental gtttacttttgttggaaattgagatactat -35 agtaaac -10 atagta Enterobacteria phage T4 Pdmd promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Run-off transcription assay gtttacaagctgacaagactatggtatagtagtcttg -35 tgtaaac -10 actata +1 c Enterobacteria phage T4 P40 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Run-off transcription assay tttgattaaagcttctacttctaaatt -35 ttaatcaaa -10 aattta Enterobacteria phage T4 PuvsX promoter Enterobacteria phage T4 middle promoter experimental tttgcttaataatccatatggttataatagaaata -35 ttaagcaaa -10 attata +1 t Enterobacteria phage T4 PsegA promoter Enterobacteria phage T4 middle promoter experimental EMSA - gel shift Primer extension S1 mapping gatgctttctattcaacatgatattttaaataaaa -35 gaaagcatc -10 aaaata +1 ta +1 t Enterobacteria phage T4 P26.0 promoter Enterobacteria phage T4 early promoter predicted ttgcttttaatcttgatgattataataagtatata -35 aagcaa -10 ttatta Enterobacteria phage T4 P42 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension attgcttttaatcttgatgattataataagtata -35 aaaagcaat -10 attata +1 t Enterobacteria phage T4 P26.1 promoter Enterobacteria phage T4 early promoter predicted ttaactggtcaattattggttggtttattacattta -35 agttaa -10 aataaa Enterobacteria phage T4 P26.2 promoter Enterobacteria phage T4 early promoter predicted tggttttagtttcaggcgtgttggctattattatatac -35 aaacca -10 ataata Enterobacteria phage T4 Pimm.1 promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Run-off transcription assay gtttacaagactgttcttccatggtactatacaacta -35 tgtaaac -10 atagta +1 t Enterobacteria phage T4 t43 terminator Rho-independent transcriptional terminator predicted ggacctccaggtcc stem_1 ggtcc stem_2 ggacc Enterobacteria phage T4 P43 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping ggggcttcggccccttatttggagtataatatatcaa -35 cgaagcccc -10 atactc +1 ttg Enterobacteria phage T4 tregA terminator Rho-independent transcriptional terminator predicted ggggcttcggcccc stem_1 gcccc stem_2 ggggc Enterobacteria phage T4 t45 terminator Rho-independent transcriptional terminator predicted gggcttcggcct stem_1 gccc stem_2 aggc Enterobacteria phage T4 P45 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping attgctttattaaattagttataaaattaaatct -35 taaagcaat -10 atttta +1 a Enterobacteria phage T4 P45.2 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping tatgctttaatttattagagtataatctctatg -35 taaagcata -10 attata +1 c Enterobacteria phage T4 P46 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aatactttttagattatgatgatatgatagaatgg -35 aaaagtatt -10 atcata +1 cc Enterobacteria phage T4 P35.3 promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ttttacaaatctatcagtacgtgttatagt -35 tgtaaaa -10 actata Enterobacteria phage T4 P47 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping ttagctttatacggagtttgatataatgatatttcttg -35 taaagctaa -10 attata +1 ga +1 c Enterobacteria phage T4 ta-gt terminator Rho-independent transcriptional terminator predicted gggcttcggccc stem_1 gccc stem_2 gggc Enterobacteria phage T4 Pagt.1 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping attgctttataaattttttggtaaaataaacta -35 taaagcaat -10 atttta +1 tag Enterobacteria phage T4 ta-gt.2 terminator Rho-independent transcriptional terminator predicted ggagcttcggctcc stem_1 gctcc stem_2 ggagc Enterobacteria phage T4 P55 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ataggtcttcaaatattatgatataatagatcta -35 aagacctat -10 attata +1 ta Enterobacteria phage T4 P55' promoter Enterobacteria phage T4 middle promoter experimental attgattcatcctctatgctttaagat -35 tgaatcaat -10 atctta Enterobacteria phage T4 t55.3 terminator Rho-independent transcriptional terminator predicted gggcttcggcct stem_1 gccc stem_2 aggc Enterobacteria phage T4 P40.4 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacattgatgatgattttgattataat -35 tgtaaac -10 attata Enterobacteria phage T4 P41.0 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacaacaagttcaaaccgtggtattat -35 tgtaaac -10 ataata Enterobacteria phage T4 tnrdH terminator Rho-independent transcriptional terminator predicted ggccctctgggcc stem_1 ggccc stem_2 gggcc Enterobacteria phage T4 P55.8 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension tttgcataaatgcgaaggttgttataatcgtagta -35 ttatgcaaa -10 attata +1 t Enterobacteria phage T4 P55.9 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ttggctattcaccagacggaaatacaatagaactaa -35 aatagccaa -10 attgta +1 tt Enterobacteria phage T4 PI-TevII promoter Enterobacteria phage T4 late promoter experimental N/A tgacatgcagctgtttatcctcgtataaata -10 tatttata Enterobacteria phage T4 P49.1 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping gatgcttcaaagaggatttgaatataatgaatctga -35 tgaagcatc -10 attata +1 t Enterobacteria phage T4 tpin terminator Rho-independent transcriptional terminator predicted cccttatctatttaaggtaaggg stem_1 agataaggg stem_2 cccttacct Enterobacteria phage T4 P49 promoter Enterobacteria phage T4 late promoter experimental N/A aatgttttacaatacttgaaaataataaata -10 tatttatt Enterobacteria phage T4 P46.7 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacactgatgaagaaacggtgtataat -35 tgtaaac -10 attata Enterobacteria phage T4 PnrdC.4 promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors Run-off transcription assay gtttactttgccacaaggatgtggtataatgttctta -35 agtaaac -10 attata +1 t Enterobacteria phage T4 P54.0 promoter Enterobacteria phage T4 early promoter experimental gtttacaagaccgttcctctgtggtactat -35 tgtaaac -10 atagta Enterobacteria phage T4 P54.4 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacaagcataaagctttatggtactat -35 tgtaaac -10 atagta Enterobacteria phage T4 tnrdC.11 terminator Rho-independent transcriptional terminator predicted gggagccttcgggctccc stem_1 ggctccc stem_2 gggagcc Enterobacteria phage T4 P57.9 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttactttccgtttgagctgtggtactat -35 agtaaac -10 atagta Enterobacteria phage T4 trI.-1 terminator Rho-independent transcriptional terminator predicted gtctccttcgggagac stem_1 ggagac stem_2 gtctcc Enterobacteria phage T4 Ptk.-1 promoter Enterobacteria phage T4 late promoter experimental N/A aaaagctcggttagtgcaaaagttataaata -10 tatttata Enterobacteria phage T4 P59.5 promoter Enterobacteria phage T4 early promoter predicted taaagctgaaaatgatttagaaacatattta -10 taaata Enterobacteria phage T4 P59.6 promoter Enterobacteria phage T4 early promoter predicted ttactcgcgaacaaaagaacgaaatattat -35 gagtaa -10 ataata Enterobacteria phage T4 P59.7 promoter Enterobacteria phage T4 early promoter predicted ataaagaacaagaactcattgattatataaa -10 tttata Enterobacteria phage T4 tvs terminator Rho-independent transcriptional terminator predicted gggcgatattgtcgccc stem_1 cgccc stem_2 gggcg Enterobacteria phage T4 Pvs promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension caagagttaaggaacttggttataat -35 taactcttg -10 attata Enterobacteria phage T4 P62.2 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacttttcctcttgactgtggtataat -35 agtaaac -10 attata Enterobacteria phage T4 PdenV promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors Run-off transcription assay gtttacatctcctgtaggtatgatactat -35 tgtaaac -10 atagta Enterobacteria phage T4 P65.0 promoter Enterobacteria phage T4 early promoter experimental Primer extension S1 mapping gtttacaactcctagaattgtgaatatatt -35 tgtaaac -10 aatata Enterobacteria phage T4 P65.1 promoter Enterobacteria phage T4 early promoter predicted ttgctaatgcagcccgtggtaattcttaataa -35 tagcaa -10 ttatta Enterobacteria phage T4 P65.5 promoter Enterobacteria phage T4 early promoter predicted ttcacaattacttgaatagacaattactaa -35 tgtgaa -10 ttagta Enterobacteria phage T4 p65.6 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttactttctcttggaattgtgatagtat -35 agtaaac -10 atacta Enterobacteria phage T4 P65.7/1 promoter Enterobacteria phage T4 early promoter predicted tttagaactggcacttgggacgcgtataaa -35 tctaaa -10 tttata Enterobacteria phage T4 P65.7/2 promoter Enterobacteria phage T4 early promoter predicted ttaacttagctaaaagtatatggtataat -35 agttaa -10 attata Enterobacteria phage T4 Pe(2) promoter Enterobacteria phage T4 late promoter experimental N/A cttttaattttataaataccttctataaata -10 tatttata Enterobacteria phage T4 Pe(1) promoter Enterobacteria phage T4 late promoter experimental N/A taatgaacaacctcttttaattttataaata -10 tatttata Enterobacteria phage T4 Pe(w) promoter Enterobacteria phage T4 late promoter experimental N/A accttctagaagacctaggtgtatttaaata -10 tatttaaa Enterobacteria phage T4 Pe.1 promoter experimental DNase1 footprinting EMSA - gel shift Promoter probe vectors aatgattttaaaaactcgctggtatgat -35 aaaatcatt -10 atcata Enterobacteria phage T4 te.6 terminator Rho-independent transcriptional terminator predicted ggggcttcggcccc stem_1 gcccc stem_2 ggggc Enterobacteria phage T4 P69.9 promoter Enterobacteria phage T4 early promoter experimental N/A gtttacaatctattagaaacgtgatattat -35 tgtaaac -10 ataata Enterobacteria phage T4 P69.4 promoter Enterobacteria phage T4 early promoter experimental N/A gtttacataggctsatgattgagatattat -35 tgtaaac -10 ataata Enterobacteria phage T4 P69.8 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Primer extension Promoter probe vectors gtttacatccttgttcttccatggtactat -35 tgtaaac -10 atagta Enterobacteria phage T4 trRNA C terminator Rho-independent transcriptional terminator predicted gccccgaccgaaaggttggggc stem_1 ggtcggggc stem_2 gccccaacc Enterobacteria phage T4 PtRNAsc1 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping tatgctttaagaattatttgttattattaactca -35 taaagcata -10 ataata +1 t Enterobacteria phage T4 PtRNA promoter Enterobacteria phage T4 late promoter experimental N/A aagtatcatccgttgaaaatggatataaata -10 tatttata Enterobacteria phage T4 PtRNA.4 promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Run-off transcription assay gtttacatagggttttagctgtgatactattacccta -35 tgtaaac -10 atagta +1 t Enterobacteria phage T4 P73.0 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacatactgatgaggtagtgatactat -35 tgtaaac -10 atagta Enterobacteria phage T4 P73.6 promoter Enterobacteria phage T4 early promoter predicted ttgataaatttaactcaggttatgattattat -35 tatcaa -10 ataata Enterobacteria phage T4 P57A promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping tttgctttagattatcttgataaatttaactca -35 taaagcaaa -10 aattta +1 t Enterobacteria phage T4 P57A-late promoter Enterobacteria phage T4 late promoter experimental N/A gcatttaataagattactgacgttataaata -10 tatttata Enterobacteria phage T4 P1 promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping aatgcttcagttttgtgtgttataatcttaatta -35 tgaagcatt -10 attata +1 taa Enterobacteria phage T4 P74.6 bacREV promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors ttgacatcacgatttcagttttgctattatctaagat -35 ttgaca -10 tattat +1 t Enterobacteria phage T4 P53 promoter Enterobacteria phage T4 late promoter experimental N/A agaatatgccattggattctccttataaata -10 tataaata Enterobacteria phage T4 P53(w) promoter Enterobacteria phage T4 late promoter experimental N/A tccttataaatagataatatatttataaaca -10 tataaaca Enterobacteria phage T4 P4 promoter Enterobacteria phage T4 late promoter experimental N/A taaagagcatgggccctcctgtttataaata -10 tatttata Enterobacteria phage T4 P5 promoter Enterobacteria phage T4 late promoter experimental N/A ctatgacagatatttttagaaactataaaga -10 tataaaga Enterobacteria phage T4 P5R promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aacgattatccatgttataataaatt -35 ataatcgtt -10 aattta Enterobacteria phage T4 p5R' promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension gatgtaaacgattatccatgttataat -35 gtttacatc -10 attata Enterobacteria phage T4 P5.1 promoter Enterobacteria phage T4 late promoter experimental N/A gaaacaggtgaaacgttagtatctataaata -10 tataaata Enterobacteria phage T4 t5.4 terminator Rho-independent transcriptional terminator predicted gccatgtgtttcatacggc stem_1 cacatggc stem_2 gccgtatg Enterobacteria phage T4 t5.4/6 terminator Rho-independent transcriptional terminator predicted ttgatggaaacactgaa stem_1 ttgatg stem_2 cactgaa Enterobacteria phage T4 P8 promoter Enterobacteria phage T4 late promoter experimental N/A ttaaacatacagagactataattaataaata -10 aataaata Enterobacteria phage T4 P9(a) promoter Enterobacteria phage T4 late promoter experimental N/A tttgagattccgcctgatgtatctataaata -10 tataaata Enterobacteria phage T4 t8 terminator Rho-independent transcriptional terminator predicted gggagcccatgggctccc stem_1 gggagcc stem_2 ggctccc Enterobacteria phage T4 p9(b) promoter Enterobacteria phage T4 late promoter experimental N/A agcccatgggctccctttttctttataaata -10 tataaata Enterobacteria phage T4 P10 promoter Enterobacteria phage T4 late promoter experimental N/A ggaagaaaaattaaaacagcagaaataaata -10 aataaata Enterobacteria phage T4 twac terminator Rho-independent transcriptional terminator predicted ggggccgcaaggcccc stem_1 ggggcc stem_2 ggcccc Enterobacteria phage T4 P15 promoter Enterobacteria phage T4 late promoter experimental N/A atttgacaatgatttcatggattaataaata -10 aataaata Enterobacteria phage T4 P17 promoter Enterobacteria phage T4 late promoter experimental N/A gtaaaacaaactttcactagtaatgtaaata -10 tgtaaata Enterobacteria phage T4 P18(w) promoter Enterobacteria phage T4 late promoter experimental N/A ataagcctgaattatttcaaacttataaaga -10 tataaaga Enterobacteria phage T4 P18 promoter Enterobacteria phage T4 late promoter experimental N/A agtatctcatggtatgtcaatggtataaata -10 tataaata Enterobacteria phage T4 P19(a) promoter Enterobacteria phage T4 late promoter experimental N/A taaaggcctgtttcggcaggccatataaata -10 tataaata Enterobacteria phage T4 P19(b) promoter Enterobacteria phage T4 late promoter experimental N/A atgccctaggttaaacatagggatataaata -10 tataaata Enterobacteria phage T4 t19 terminator Rho-independent transcriptional terminator predicted ggggagaaatcccc stem_1 gggga stem_2 tcccc Enterobacteria phage T4 P20 promoter Enterobacteria phage T4 late promoter experimental N/A ctgcttaaagcagagaagtccattataaata -10 tataaata Enterobacteria phage T4 P67 promoter Enterobacteria phage T4 late promoter experimental N/A acagaagatgagtggaatgatgaaataaata -10 aataaata Enterobacteria phage T4 P21 promoter Enterobacteria phage T4 late promoter experimental N/A tcttctgctttaaataaagacgatataaata -10 tataaata Enterobacteria phage T4 P22 promoter Enterobacteria phage T4 late promoter experimental N/A cgcagaggccatgaaaaaagcgttataaata -10 tataaata Enterobacteria phage T4 P23(w) promoter Enterobacteria phage T4 late promoter experimental N/A tcgtagaaatggtgaagaaatctaataaaga -10 aataaaga Enterobacteria phage T4 P23 promoter Enterobacteria phage T4 late promoter experimental N/A gatgaaagcactattactgagagtataaata -10 tataaata Enterobacteria phage T4 t23 terminator Rho-independent transcriptional terminator predicted gggaaccttcgggttccc stem_1 gggaacc stem_2 ggttccc Enterobacteria phage T4 P106.0 promoter Enterobacteria phage T4 early promoter experimental tttacaagaccaaagtaatatgatattat -35 tgtaaa -10 ataata Enterobacteria phage T4 P24 promoter Enterobacteria phage T4 late promoter experimental N/A tactttggtcttgtaaataactttataaata -10 tataaata Enterobacteria phage T4 t24(a) terminator Rho-independent transcriptional terminator predicted gggacctttcggtccc stem_1 gggacc stem_2 ggtccc Enterobacteria phage T4 t24(b) terminator Rho-independent transcriptional terminator predicted gtacatcttgtac stem_1 gtaca stem_2 tgtac Enterobacteria phage T4 Panti-late promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension ttagattctgtcgtccaagattataat -35 agaatctaa -10 attata Enterobacteria phage T4 thoc terminator Rho-independent transcriptional terminator predicted ggggcttcggcccc stem_1 gcccc stem_2 ggggc Enterobacteria phage T4 Phoc.2 promoter Enterobacteria phage T4 late promoter experimental N/A tatctatcataatatttcctcagtataaata -10 tataaata Enterobacteria phage T4 Phoc.1 promoter Enterobacteria phage T4 late promoter experimental N/A gtggtacatactattttccgagtaataaata -10 tatttatt Enterobacteria phage T4 PuvsW promoter Enterobacteria phage T4 late promoter experimental N/A actttttgggtcaataatggcgcaataaata -10 aataaata Enterobacteria phage T4 tuvsY.-2 terminator Rho-independent transcriptional terminator predicted ggcccttcctttttggttgggcc stem_1 ggaagggcc stem_2 ggcccaacc Enterobacteria phage T4 PuvsW.1 promoter Enterobacteria phage T4 late promoter experimental N/A cattgatatgcatatgagagttgtataaata -10 tatttata Enterobacteria phage T4 PuvsY promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping aatgcttcacgttaaaacgtggtataatgaatcta -35 tgaagcatt -10 attata +1 ta Enterobacteria phage T4 P25(w) promoter Enterobacteria phage T4 late promoter experimental N/A gataaataaaggagctaaatatgtatgaata -10 tattcata Enterobacteria phage T4 P51 promoter Enterobacteria phage T4 late promoter experimental N/A ttagctcctttatttatcatatttataaata -10 tataaata Enterobacteria phage T4 P26(w) promoter Enterobacteria phage T4 late promoter experimental N/A ccttttattctatttataaatatgataaata -10 tatttatc Enterobacteria phage T4 P26(a) promoter Enterobacteria phage T4 late promoter experimental N/A atagatgctccttttattctatttataaata -10 tatttata Enterobacteria phage T4 P115.8 promoter Enterobacteria phage T4 early promoter experimental tttacttattgaatttaagctataat -35 agtaaa -10 attata Enterobacteria phage T4 t54 terminator Rho-independent transcriptional terminator predicted tggggaccgaaaggtccata stem_1 tggggacc stem_2 ggtccata Enterobacteria phage T4 Palt promoter Enterobacteria phage T4 late promoter experimental N/A aaaggccttcgggcctttaattttataaata -10 tatttata Enterobacteria phage T4 talt.1 terminator Rho-independent transcriptional terminator predicted ggccttcgggcc stem_1 ggcc stem_2 ggcc Enterobacteria phage T4 P125.9 promoter Enterobacteria phage T4 early promoter predicted ttgactgagcttaatgatgaattgatttataat -35 agtcaa -10 attata Enterobacteria phage T4 P128.2 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttactttggtacaggatatgatattat -35 agtaaac -10 ataata Enterobacteria phage T4 P128.6 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacagtatagttcctttgtgatagtat -35 tgtaaac -10 atacta Enterobacteria phage T4 t30.9(a) terminator Rho-independent transcriptional terminator predicted ggactccttcgggagtcc stem_1 ggagtcc stem_2 ggactcc Enterobacteria phage T4 t30.9(b) terminator Rho-independent transcriptional terminator predicted cgagatgatgcttctcg stem_1 catctcg stem_2 cgagaag Enterobacteria phage T4 P31.-1 promoter Enterobacteria phage T4 late promoter experimental N/A ctattccgtgtctttataagtgatataaata -10 tatttata Enterobacteria phage T4 Pcd promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension S1 mapping actatgatgaatttaactgatataat -35 catcatagt -10 attata Enterobacteria phage T4 P131.7 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttactttacggtagagttgtgatattat -35 agtaaac -10 ataata Enterobacteria phage T4 Pcd.3 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aaagatttatcgtctttgtgataaaat -35 ataaatcttt -10 atttta Enterobacteria phage T4 PpseT.1 promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aatgattaaactatcagcagtaatat -35 ttaatcatt -10 atatta Enterobacteria phage T4 P134.4 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacaagtccctcgtgttgtgttatagt -35 tgtaaac -10 actata Enterobacteria phage T4 Panti-63 promoter Enterobacteria phage T4 late promoter experimental N/A atacggacgaagagtagcatctttataaata -10 tataaata Enterobacteria phage T4 tnrdB terminator Rho-independent transcriptional terminator predicted tgggccgcaaggccca stem_1 ggccca stem_2 tgggcc Enterobacteria phage T4 PnrdBin promoter Enterobacteria phage T4 middle promoter experimental Primer extension Promoter probe vectors tttgcttgcacctttaattagtataatataaata -35 gcaagcaaa -10 attata +1 t Enterobacteria phage T4 PnrdB.iI promoter Enterobacteria phage T4 late promoter experimental N/A gcttgcacctttaattagtataatataaata -10 tatttata Enterobacteria phage T4 PnrdB promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping cgtgcttaatccgatgtatggtacaatttctccg -35 ttaagcacg -10 attgta +1 c Enterobacteria phage T4 tnrdA terminator Rho-independent transcriptional terminator predicted ttcccgagctcaggctcgggaa stem_1 gctcgggaa stem_2 ttcccgagc Enterobacteria phage T4 PnrdA promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aaccaaagccgtgtcatggtgatataatagctcata -35 gctttggtt -10 attata +1 t +1 t Enterobacteria phage T4 P141.0 promoter Enterobacteria phage T4 early promoter experimental S1 mapping ttgaattattcaaaaaagattttatacgtcgaatta -35 attcaa -10 cgtata +1 t Enterobacteria phage T4 PI-TevI promoter Enterobacteria phage T4 late promoter experimental N/A ctaaattgtaggacttgccctttaataaata -10 tatttatt Enterobacteria phage T4 Ptd promoter Enterobacteria phage T4 middle promoter experimental DNase1 footprinting EMSA - gel shift Primer extension aatggttgaaacgcattggtataaaatagatgaag -35 tcaaccatt -10 atttta +1 c Enterobacteria phage T4 P144.6 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacaagcataaagctttatggtactat -35 tgtaaac -10 atagta Enterobacteria phage T4 t32 terminator Rho-independent transcriptional terminator predicted gggaccctagaggtccc stem_1 ggtccc stem_2 gggacc Enterobacteria phage T4 P144.8 REV promoter Enterobacteria phage T4 early promoter experimental Linker scanning mutations tagggtccccaattaattagtaatataat -35 tagggt -10 tataat Enterobacteria phage T4 P145.7 promoter Enterobacteria phage T4 early promoter experimental Promoter probe vectors RNase protection assay ttgcgaattatgccagctatgaggtaaagt -35 tcgcaa -10 acttta Enterobacteria phage T4 P32(late) promoter Enterobacteria phage T4 late promoter experimental N/A ggatggcgaagagttaaaggtaatataaata -10 tatttata Enterobacteria phage T4 P32 promoter Enterobacteria phage T4 middle promoter experimental Promoter probe vectors RNase protection assay attgcttacgagaattatgtgttattat -35 gtaagcaat -10 ataata Enterobacteria phage T4 P147.1 promoter Enterobacteria phage T4 early promoter experimental ttgctaaatttattccttcgggtataat -35 tagcaa -10 attata Enterobacteria phage T4 PdsbA promoter Enterobacteria phage T4 middle promoter experimental attgcttcaaacattgtgaattactataattcatat -35 tgaagcaat -10 atagta +1 a +1 a Enterobacteria phage T4 P147.7/1 promoter Enterobacteria phage T4 early promoter experimental ttgcttcaaacattgtgaattactataat -35 aagcaa -10 attata Enterobacteria phage T4 P147.7/2 promoter Enterobacteria phage T4 early promoter experimental ttgattttgattatattcctgataatat -35 aatcaa -10 atatta Enterobacteria phage T4 P148.6 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttactttaagatttggatggtatataat -35 agtaaac -10 attata Enterobacteria phage T4 P34 promoter Enterobacteria phage T4 late promoter experimental N/A atccaaatcttaaagtaaacaagtataaata -10 tataaata Enterobacteria phage T4 P34i promoter Enterobacteria phage T4 middle promoter experimental Primer extension S1 mapping tttgcttcaagaatattaagtgtataatggtcccag -35 tgaagcaaa -10 attata +1 ctg Enterobacteria phage T4 t34/35 terminator Rho-independent transcriptional terminator predicted ggccgagtttggacaaggatatgtccaaacgcc stem_1 ggccgagtttggaca stem_2 tgtccaaacgcc Enterobacteria phage T4 t35 terminator Rho-independent transcriptional terminator predicted gggacccttcgggttccc stem_1 gggaccc stem_2 ggttccc Enterobacteria phage T4 P36 promoter Enterobacteria phage T4 late promoter experimental N/A acccttcgggttccctttttctttataaata -10 tataaata Enterobacteria phage T4 P37 promoter Enterobacteria phage T4 late promoter experimental N/A agaaaggactatgttgatggagcaataaata -10 aataaata Enterobacteria phage T4 t37 terminator Rho-independent transcriptional terminator predicted gggcttcggccc stem_1 gggc stem_2 gccc Enterobacteria phage T4 Pt promoter Enterobacteria phage T4 late promoter experimental N/A taagcgtttattcaagcattacgtataaata -10 tataaata Enterobacteria phage T4 tt terminator Rho-independent transcriptional terminator predicted ccctcgttgaattcgtcgatgaggg stem_1 ccctcgttgaa stem_2 tcgatgaggg Enterobacteria phage T4 P158.7 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacaaatcaagcgtctgatgatattat -35 tgtaaac -10 ataata Enterobacteria phage T4 PmotA promoter Enterobacteria phage T4 early promoter experimental DNase1 footprinting EMSA - gel shift Primer extension Promoter probe vectors Run-off transcription assay gtttacaaccaaagcatactgtggtactatacaacta -35 tgtaaac -10 atagta +1 t Enterobacteria phage T4 tmotA.1 terminator Rho-independent transcriptional terminator predicted gggagagccgaggctctccc stem_1 gctctccc stem_2 gggagagc Enterobacteria phage T4 tac terminator Rho-independent transcriptional terminator predicted gggctattcattagccc stem_1 tagccc stem_2 gggcta Enterobacteria phage T4 tstp terminator Rho-independent transcriptional terminator predicted ggcgtccgaagacgcc stem_1 ggcgtc stem_2 gacgcc Enterobacteria phage T4 P164.2 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacaagactgttcttccgtggtactat -35 ttgtaaac -10 atagta Enterobacteria phage T4 P164.5 promoter Enterobacteria phage T4 early promoter experimental EMSA - gel shift Promoter probe vectors gtttacataccacaaggaccgtggtactat -35 tgtaaac -10 atagta Enterobacteria phage T4 tdenB.1 terminator Rho-independent transcriptional terminator predicted gggcttcggcct stem_1 gccc stem_2 aggc Enterobacteria phage T4 trIIB terminator Rho-independent transcriptional terminator predicted taaggcttcggccctta stem_1 gcctta stem_2 taagggc Bacillus phage B103 A1 promoter Bacillus phage B103 A1 promoter experimental DNase1 footprinting Primer extension ttgacaaatggtagaatttatggtataat -35 tgtcaa -10 attata Bacillus phage B103 TA1 terminator Bacillus phage B103 rho-independent terminator TA1 experimental acgtggtgtctaacggtgatgccacgt stem_1 gacaccacgt stem_2 acgtggcatc Bacillus phage B103 A2c promoter Bacillus phage B103 A2c promoter experimental DNase1 footprinting Primer extension ttgaaaattgttgaacagcatgatatact -35 tttcaa -10 agtata Bacillus phage B103 A2b promoter Bacillus phage B103 A2b promoter experimental DNase1 footprinting Primer extension ttgcattttgttaacaccagttaaaataat -35 atgcaa -10 attatt Bacillus phage B103 A3 promoter Bacillus phage B103 A3 promoter experimental DNase1 footprinting Primer extension atgaataccaagggttcccgtgatataat -10 tataat Bacillus phage B103 TD1 terminator Bacillus phage B103 rho-independent terminator TD1 experimental cctgctgttataataacggcagg stem_1 cctgctgttat stem_2 ataacggcagg Bacillus phage B103 C1a promoter Bacillus phage B103 C1a promoter experimental DNase1 footprinting Primer extension ttgacaaacacatgcggaaacaggggtataaa -35 tgtcaa -10 tttata Bacillus phage B103 C2 promoter Bacillus phage B103 C2 promoter experimental DNase1 footprinting Primer extension tagacaaccagactataaaatgttatact -35 tgtcta -10 agtata Yersinia phage phiYeO3-12 phiOL promoter Yersinia phage phiYeO3-12 putative promoter predicted cattaaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi1.05 promoter Yersinia phage phiYeO3-12 putative promoter predicted cattaaccctcactaacg +1 g Yersinia phage phiYeO3-12 phi1.1 promoter Yersinia phage phiYeO3-12 putative promoter predicted agttaaccctcactaacg +1 g Yersinia phage phiYeO3-12 phi1.3 promoter Yersinia phage phiYeO3-12 putative promoter predicted taataaccctcactaaca +1 a Yersinia phage phiYeO3-12 phi1.5 promoter Yersinia phage phiYeO3-12 putative promoter predicted cattaaccctcactaaca +1 a Yersinia phage phiYeO3-12 phi2.5 promoter Yersinia phage phiYeO3-12 putative promoter predicted taattaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi3.8 promoter Yersinia phage phiYeO3-12 putative promoter predicted aattaacactcactaaag +1 g Yersinia phage phiYeO3-12 phi4.3 promoter Yersinia phage phiYeO3-12 putative promoter predicted aattaaccctcactaacg +1 g Yersinia phage phiYeO3-12 phi6.5 promoter Yersinia phage phiYeO3-12 putative promoter predicted tattaaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi9 promoter Yersinia phage phiYeO3-12 putative promoter predicted taataaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi10 promoter Yersinia phage phiYeO3-12 putative promoter predicted aattaaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi11 promoter Yersinia phage phiYeO3-12 putative promoter predicted ctttaaccctcactaaca +1 a Yersinia phage phiYeO3-12 phi13 promoter Yersinia phage phiYeO3-12 putative promoter predicted aattaaccctcactaaag +1 g Yersinia phage phiYeO3-12 phi17 promoter Yersinia phage phiYeO3-12 putative promoter predicted aataaaccctcactaaag +1 g Yersinia phage phiYeO3-12 phiOR promoter Yersinia phage phiYeO3-12 putative promoter predicted cattaaccctcactaaag +1 g Enterobacteria phage T3 A0 promoter T3 promoter for host RNA polymerase (leftward) experimental N/A ttgactttaggcatcactttaggct -35 agtcaa -10 agccta Enterobacteria phage T3 phiOL promoter T3 promoter for T3 RNA polymerase experimental N/A tatttaccctcactaaagggaat Enterobacteria phage T3 A1 promoter T3 promoter for host RNA polymerase experimental N/A ttgactttaagttacctttaaggctattat -35 ttgact -10 tattat Enterobacteria phage T3 A2 promoter T3 promoter for host RNA polymerase experimental N/A ttgacaacgcaaggtaacaagtagtaagat -35 ttgaca -10 taagat Enterobacteria phage T3 A3 promoter T3 promoter for host RNA polymerase experimental N/A ttgacaacatgaagtaagcacggtacgat -35 ttgaca -10 tacgat Enterobacteria phage T3 B promoter T3 promoter for host RNA polymerase experimental N/A atgagttcggtcgccgctggcaagtacaat -35 atgagt -10 tacaat Enterobacteria phage T3 C promoter T3 promoter for host RNA polymerase experimental N/A ttgacaagcgtctacaaggctgatagagt -35 ttgaca -10 tagagt Enterobacteria phage T3 phi1.05 promoter T3 promoter for T3 RNA polymerase experimental N/A cattaaccctcactaacgggaga Enterobacteria phage T3 phi1.1 promoter T3 promoter for T3 RNA polymerase experimental N/A agttaaccctcactaacgggaga Enterobacteria phage T3 phi1.3 promoter T3 promoter for T3 RNA polymerase experimental N/A taataaccctcactaacaggaga Enterobacteria phage T3 TE terminator T3 rho-independent early transcriptional terminator TE experimental ggctcaccttcacgggtgggcc stem_1 ggctcacc stem_2 ggtgggcc Enterobacteria phage T3 phi1.5 promoter T3 promoter for T3 RNA polymerase experimental N/A cattaaccctcactaacaggaga Enterobacteria phage T3 phi2.5 promoter T3 promoter for T3 RNA polymerase experimental N/A taattaccctcactaaagggaac Enterobacteria phage T3 phi3.8 promoter T3 promoter for T3 RNA polymerase experimental N/A aattaacactcactaaagggaga Enterobacteria phage T3 phi4.3 promoter T3 promoter for T3 RNA polymerase experimental N/A aattaaccctcactaacgggaac Enterobacteria phage T3 phi6.5 promoter T3 promoter for T3 RNA polymerase experimental N/A aattaaccctcactaaagggaag Enterobacteria phage T3 phi9 promoter T3 promoter for T3 RNA polymerase experimental N/A taattaccctcactaaagggaga Enterobacteria phage T3 phi10 promoter T3 promoter for T3 RNA polymerase experimental N/A aattaaccctcactaaagggaga Enterobacteria phage T3 Tphi terminator T3 rho-independent major transcriptional terminator experimental aaaccccttgggttccctctttgggagtctgaggggttt stem_1 aaaccccttgggttccc stem_2 gggagtctgaggggttt Enterobacteria phage T3 phi11 promoter T3 promoter for T3 RNA polymerase experimental N/A ctttaaccctcactaacaggagg Enterobacteria phage T3 phi13 promoter T3 promoter for T3 RNA polymerase experimental N/A aattaaccctcactaaagggaga Enterobacteria phage T3 phiOR promoter T3 promoter for T3 RNA polymerase experimental N/A cattaaccctcactaaagggaga Pseudomonas phage gh-1 A1 promoter Putative early promoter for host RNA polymerase predicted attgacactgagaccatccataggctatcgcgtgtgtgcgc Pseudomonas phage gh-1 A2 promoter Putative early promoter for host RNA polymerase predicted gttgtttacaaccatcgaggatcagtgtctaatggctcccatcaa Pseudomonas phage gh-1 A3 promoter Putative early promoter for host RNA polymerase predicted cttgacaagatgatggaacgctgtagaatggccaccatcaacaa Pseudomonas phage gh-1 phi1 promoter Putative gh-1 RNAP promoter predicted taaaaaccctcactgtggctgca Pseudomonas phage gh-1 A4 promoter Putative gh-1 RNAP promoter predicted ctgcacacactatgggggcttttatcttaaagacatctcaaaggt Pseudomonas phage gh-1 phi2 promoter Putative gh-1 RNAP promoter predicted atgcaagtcactatcgccgct Pseudomonas phage gh-1 phi3 promoter Putative gh-1 RNAP promoter predicted gcgtcaaggccactcaggaactc Pseudomonas phage gh-1 phi4 promoter Putative gh-1 RNAP promoter predicted ttaaaaaccctcactttggctgca Pseudomonas phage gh-1 phi5 promoter Putative gh-1 RNAP promoter predicted ttaaaaaccctcactgtggctgca Pseudomonas phage gh-1 phi6 promoter Putative gh-1 RNAP promoter predicted tttaaaaaccctcactgtggctca Pseudomonas phage gh-1 phi7 promoter Putative gh-1 RNAP promoter predicted catcactggcatcca Pseudomonas phage gh-1 phi8 promoter Putative gh-1 RNAP promoter predicted ccacatgaaagcactgaaatcgtt Pseudomonas phage gh-1 phi9 promoter Putative gh-1 RNAP promoter predicted gcgcgagtgccactaaggagaacc Pseudomonas phage gh-1 phi10 promoter Putative gh-1 RNAP promoter predicted taaaaaccctcactatggccatag Pseudomonas phage gh-1 phi11 promoter Putative gh-1 RNAP promoter predicted agatggcgagcactacggacgttc Pseudomonas phage gh-1 phi12 promoter Putative gh-1 RNAP promoter predicted tttaaaaccctcactatggctgca Pseudomonas phage gh-1 phi13 promoter Putative gh-1 RNAP promoter predicted taaaaaccctcactatggctgcat Pseudomonas phage gh-1 phi14 promoter Putative gh-1 RNAP promoter predicted ttacgaagcaacactcgaaacagatgacgaactcgcagccatcaacgacatgctcgcagcaatcggtgagtcccctgtgagttcccttgagggggaccctaacgctgacgtggcgaacgctcgc Pseudomonas phage gh-1 phi15 promoter Putative gh-1 RNAP promoter predicted caaaaaccctcactatggcaccctatgagggtttctttatgatcttgacac Pseudomonas phage gh-1 phi16 promoter Putative gh-1 RNAP promoter predicted taaaacccctcactatggcaccct Pseudomonas phage gh-1 phi17 promoter Putative gh-1 RNAP promoter predicted taaaaaccctcactatggcccaga